RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1146029", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1146029 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23242591 23242591 PRJNA1146029_P_NODE_5759_length_365_cov_1.845890_g5481_i0 PRJNA1146029 5759 365 1.84589 6.7374985 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 230 1.4899999999999995e-55   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g5481 i0 80.062 3.66575342465753 321 55 87 8 10 326 125737 126052 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 1338 230 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
24515868 24515868 PRJNA1146029_P_NODE_11300_length_282_cov_2.105263_g11019_i0 PRJNA1146029 11300 282 2.105263 5.93684166 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 477 3.6199999999999986e-130   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g11019 i0 97.163 179.202127659574 282 8 100 0 1 282 962496 962215 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 50535 477 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;