RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1146029", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1146029 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27639447 27639447 PRJNA1146029_P_NODE_9984_length_290_cov_1.364055_g9703_i0 PRJNA1146029 9984 290 1.364055 3.9557595 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 111 4.31e-29   NR HUG62538.1 2072417 g9703 i0 64.4 1.8 87 31 90 0 4 264 35 121 HUG62538.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 522 111 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32315568 32315568 PRJNA1146029_P_NODE_22599_length_226_cov_2.980392_g22317_i0 PRJNA1146029 22599 226 2.980392 6.73568592 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 56.6 3.52e-7   NR HEV8586780.1 2072417 g22317 i0 41.9 0.982300884955752 74 42 98.2 1 224 3 44 116 HEV8586780.1 tetratricopeptide repeat protein [Candidatus Methylomirabilota bacterium] diamond 222 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;