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contig_metadata

14 rows where bioproject = "PRJNA1145997" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1145997 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16866684 16866684 PRJNA1145997_P_NODE_41014_length_260_cov_1.529412_g38395_i0 PRJNA1145997 41014 260 1.529412 3.9764712 Nitratidesulfovibrio liaohensis 2604158 Bacteria Bacteria 305 1.65e-78   NTclustered gi|2575677524|gb|CP133659.1| 2604158 g38395 i0 89.627 1.83461538461538 241 24 92 1 6 245 635886 636126 Nitratidesulfovibrio liaohensis strain KPS chromosome, complete genome blastn 477 305 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Nitratidesulfovibrio Nitratidesulfovibrio liaohensis
20690982 20690982 PRJNA1145997_P_NODE_35337_length_306_cov_1.339056_g32718_i0 PRJNA1145997 35337 306 1.339056 4.09751136 Nitratidesulfovibrio liaohensis 2604158 Bacteria Bacteria 411 4.089999999999999e-110   NTclustered gi|2575677524|gb|CP133659.1| 2604158 g32718 i0 90.566 1.47058823529412 318 18 100 4 1 306 678951 678634 Nitratidesulfovibrio liaohensis strain KPS chromosome, complete genome blastn 450 411 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Nitratidesulfovibrio Nitratidesulfovibrio liaohensis
24515430 24515430 PRJNA1145997_P_NODE_41440_length_257_cov_2.130435_g38821_i0 PRJNA1145997 41440 257 2.130435 5.47521795 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 75 4.99e-9   NTclustered gi|2556892445|gb|CP129479.1| 2202153 g38821 i0 88.71 2.45525291828794 62 6 24 1 23 84 861757 861697 MAG: Thermodesulfobacteriota bacterium isolate cMAG.17 chromosome, complete genome blastn 631 75 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27133420 27133420 PRJNA1145997_P_NODE_51502_length_207_cov_4.395522_g48883_i0 PRJNA1145997 51502 207 4.395522 9.09873054 Geobacter sp. AOG1 1566346 Bacteria Bacteria 42 0.0444   NR WP_223906802.1 1566346 g48883 i0 51.3 0.565217391304348 39 18 55.1 1 155 42 1655 1693 WP_223906802.1 S8 family serine peptidase [Geobacter sp. AOG1] diamond 117 42 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geobacter Geobacter sp. AOG1
27533421 27533421 PRJNA1145997_P_NODE_42243_length_253_cov_0.866667_g39624_i0 PRJNA1145997 42243 253 0.866667 2.19266751 Pseudomonadati 3379134 Bacteria Bacteria 75.9 5.59e-14   NR WP_011938900.1 351604 g39624 i0 60.3 8.72727272727273 73 26 86.6 1 243 25 3 72 WP_011938900.1 NAD-dependent epimerase/dehydratase family protein [Geotalea uraniireducens] diamond 2208 75.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geotalea Geotalea uraniireducens
27891703 27891703 PRJNA1145997_P_NODE_43385_length_251_cov_0.876404_g40766_i0 PRJNA1145997 43385 251 0.876404 2.19977404 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 135 1.3599999999999999e-34   NR MEF8888959.1 2683721 g40766 i0 80.7 0.99203187250996006 83 16 99.2 0 251 3 72 154 MEF8888959.1 cation-translocating P-type ATPase [Desulfohalobiaceae bacterium] diamond 249 135 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
27923388 27923388 PRJNA1145997_P_NODE_44625_length_249_cov_0.886364_g42006_i0 PRJNA1145997 44625 249 0.886364 2.20704636 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 90.1 8.01e-20   NR MFO8032327.1 2683721 g42006 i0 51.8 1 83 40 100 0 249 1 44 126 MFO8032327.1 flagellar motor protein MotB [Desulfohalobiaceae bacterium] diamond 249 90.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
28270523 28270523 PRJNA1145997_P_NODE_49886_length_236_cov_3.079755_g47267_i0 PRJNA1145997 49886 236 3.079755 7.2682218 Desulfosarcina cetonica 90730 Bacteria Bacteria 44.7 0.00134   NR VTR71182.1 90730 g47267 i0 32.1 0.673728813559322 53 36 67.4 0 180 22 17 69 VTR71182.1 hypothetical protein DESC_90052 [Desulfosarcina cetonica] diamond 159 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfosarcina Desulfosarcina cetonica
28681359 28681359 PRJNA1145997_P_NODE_45147_length_248_cov_0.891429_g42528_i0 PRJNA1145997 45147 248 0.891429 2.21074392 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 62.4 3.23e-9   NR MCF8030916.1 2683721 g42528 i0 66.7 0.508064516129032 42 14 50.8 0 248 123 241 282 MCF8030916.1 hypothetical protein [Desulfohalobiaceae bacterium] diamond 126 62.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
29881201 29881201 PRJNA1145997_P_NODE_42171_length_253_cov_1.300000_g39552_i0 PRJNA1145997 42171 253 1.3 3.289 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 162 3.74e-46   NR MCF8085321.1 2683721 g39552 i0 85.7 0.99604743083004 84 12 99.6 0 1 252 294 377 MCF8085321.1 histone deacetylase [Desulfohalobiaceae bacterium] diamond 252 162 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
29912774 29912774 PRJNA1145997_P_NODE_44051_length_250_cov_0.881356_g41432_i0 PRJNA1145997 44051 250 0.881356 2.20339 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 73.2 7.68e-13   NR MEF8942928.1 2683721 g41432 i0 76.1 0.552 46 11 55.2 0 140 3 1 46 MEF8942928.1 SNF2-related protein [Desulfohalobiaceae bacterium] diamond 138 73.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
30955459 30955459 PRJNA1145997_P_NODE_36914_length_290_cov_1.078341_g34295_i0 PRJNA1145997 36914 290 1.078341 3.1271889 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 166 2.26e-47   NR MEF8889601.1 2683721 g34295 i0 81.3 0.993103448275862 96 18 99.3 0 290 3 267 362 MEF8889601.1 glycerol-3-phosphate dehydrogenase subunit GlpB [Desulfohalobiaceae bacterium] diamond 288 166 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
31935375 31935375 PRJNA1145997_P_NODE_30877_length_368_cov_1.057627_g28258_i0 PRJNA1145997 30877 368 1.057627 3.89206736 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 129 1.7399999999999997e-35   NR MEF8889110.1 2683721 g28258 i0 72.5 1.30434782608696 80 22 65.2 0 2 241 65 144 MEF8889110.1 hypothetical protein [Desulfohalobiaceae bacterium] diamond 480 129 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
32599876 32599876 PRJNA1145997_P_NODE_49000_length_242_cov_0.923077_g46381_i0 PRJNA1145997 49000 242 0.923077 2.23384634 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 99 2.7900000000000003e-22   NR MCF8085352.1 2683721 g46381 i0 91.8 0.607438016528926 49 4 60.7 0 1 147 361 409 MCF8085352.1 cell division protein FtsA [Desulfohalobiaceae bacterium] diamond 147 99 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;