RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1145997" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1145997 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30975887 30975887 PRJNA1145997_P_NODE_45574_length_247_cov_3.149425_g42955_i0 PRJNA1145997 45574 247 3.149425 7.77907975 root 1 Root_unresolved Root_unresolved 60.1 7.79e-9   NR CAA10165.1 1891767 g42955 i0 60 2.96356275303644 50 16 55.9 1 142 5 77 126 CAA10165.1 large tumor antigen [Betapolyomavirus macacae] diamond 732 60.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
31196517 31196517 PRJNA1145997_P_NODE_26035_length_486_cov_5.552058_g23419_i0 PRJNA1145997 26035 486 5.552058 26.98300188 root 1 Root_unresolved Root_unresolved 73.2 1e-12   NR CAA10165.1 1891767 g23419 i0 56.9 1.5679012345679 65 24 37.7 1 304 486 77 141 CAA10165.1 large tumor antigen [Betapolyomavirus macacae] diamond 762 73.2 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;