RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1145997" and tax_phylum = "Candidatus Spechtiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Spechtiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1145997 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32788561 32788561 PRJNA1145997_P_NODE_24360_length_539_cov_7.289700_g21747_i0 PRJNA1145997 24360 539 7.2897 39.291483 Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_ 2750079 Bacteria Bacteria 112 5.89e-25   NR OGZ58826.1 1802157 g21747 i0 39.1 2.85528756957328 169 92 94.1 2 12 518 384 541 OGZ58826.1 MAG: hypothetical protein A2728_00135 [Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_38_11] diamond 1539 112 1 Bacteria Bacteria candidate phyla   Candidatus Spechtiibacteriota         Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_38_11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;