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contig_metadata

32 rows where bioproject = "PRJNA1145997", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 32 ✖

tax_kingdom 1

  • Pseudomonadati · 32 ✖

bioproject 1

  • PRJNA1145997 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
289603 289603 PRJNA1145997_P_NODE_45201_length_248_cov_0.891429_g42582_i0 PRJNA1145997 45201 248 0.891429 2.21074392 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 164 2.3299999999999997e-46   NR HUQ93857.1 2212468 g42582 i0 91.5 2.9758064516129 82 7 99.2 0 246 1 349 430 HUQ93857.1 DUF1501 domain-containing protein [Bryobacteraceae bacterium] diamond 738 164 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
1564271 1564271 PRJNA1145997_P_NODE_44062_length_250_cov_0.881356_g41443_i0 PRJNA1145997 44062 250 0.881356 2.20339 Acidobacteriota 57723 Bacteria Bacteria 91.7 5.51e-20   NR MCC6536984.1 2026791 g41443 i0 59.8 1.956 82 31 96 1 247 8 108 189 MCC6536984.1 YcaQ family DNA glycosylase [Bryobacterales bacterium] diamond 489 91.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
18885118 18885118 PRJNA1145997_P_NODE_45835_length_247_cov_0.896552_g43216_i0 PRJNA1145997 45835 247 0.896552 2.21448344 Bryobacterales bacterium 2026791 Bacteria Bacteria 152 9.38e-42   NR MCC6364849.1 2026791 g43216 i0 96.2 1.89473684210526 78 3 94.7 0 2 235 404 481 MCC6364849.1 lysine--tRNA ligase [Bryobacterales bacterium] diamond 468 152 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
19415614 19415614 PRJNA1145997_P_NODE_40476_length_263_cov_4.252632_g37857_i0 PRJNA1145997 40476 263 4.252632 11.18442216 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 357 4.54e-94   NTclustered gi|2874253710|emb|OY969475.1| 2283092 g37857 i0 93.724 293.117870722433 239 14 90 1 21 258 1821844 1821606 MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 blastn 77090 357 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
24515413 24515413 PRJNA1145997_P_NODE_40580_length_263_cov_1.231579_g37961_i0 PRJNA1145997 40580 263 1.231579 3.23905277 Acidobacteriota bacterium 1978231 Bacteria Bacteria 135 2.51e-36   NR MBM3794732.1 1978231 g37961 i0 75.9 0.992395437262357 87 21 99.2 0 2 262 137 223 MBM3794732.1 inorganic phosphate transporter [Acidobacteriota bacterium] diamond 261 135 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26595484 26595484 PRJNA1145997_P_NODE_37861_length_282_cov_1.492823_g35242_i0 PRJNA1145997 37861 282 1.492823 4.20976086 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 157 1.96e-45   NR MEP6537327.1 2212468 g35242 i0 77.4 1.97872340425532 93 21 98.9 0 2 280 39 131 MEP6537327.1 GDSL-type esterase/lipase family protein [Bryobacteraceae bacterium] diamond 558 157 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26595488 26595488 PRJNA1145997_P_NODE_48341_length_243_cov_0.917647_g45722_i0 PRJNA1145997 48341 243 0.917647 2.22988221 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 87.8 2.65e-18   NR HET9525075.1 2283092 g45722 i0 47.9 1.16049382716049 94 34 97.5 1 239 3 89 182 HET9525075.1 SMP-30/gluconolactonase/LRE family protein [Pyrinomonadaceae bacterium] diamond 282 87.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26838128 26838128 PRJNA1145997_P_NODE_39841_length_268_cov_1.451282_g37222_i0 PRJNA1145997 39841 268 1.451282 3.88943576 Bacteria 2 Bacteria Bacteria 138 2.75e-38   NR MSV36030.1 2026791 g37222 i0 63.6 7.84701492537313 88 32 98.5 0 266 3 71 158 MSV36030.1 ComF family protein [Bryobacterales bacterium] diamond 2103 138 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27038902 27038902 PRJNA1145997_P_NODE_42302_length_253_cov_0.866667_g39683_i0 PRJNA1145997 42302 253 0.866667 2.19266751 Acidobacteriota bacterium 1978231 Bacteria Bacteria 92.8 1.86e-21   NR MBK9241559.1 1978231 g39683 i0 90.7 0.640316205533597 54 5 64 0 247 86 127 180 MBK9241559.1 hypothetical protein [Acidobacteriota bacterium] diamond 162 92.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27375894 27375894 PRJNA1145997_P_NODE_37363_length_286_cov_1.464789_g34744_i0 PRJNA1145997 37363 286 1.464789 4.18929654 Bacteria 2 Bacteria Bacteria 58.9 1.31e-7   NR REJ79722.1 1978231 g34744 i0 55.3 1.47902097902098 47 21 49.3 0 285 145 1067 1113 REJ79722.1 MAG: helix-turn-helix domain-containing protein [Acidobacteriota bacterium] diamond 423 58.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27418467 27418467 PRJNA1145997_P_NODE_47683_length_244_cov_0.912281_g45064_i0 PRJNA1145997 47683 244 0.912281 2.22596564 Bryobacterales bacterium 2026791 Bacteria Bacteria 96.3 5.57e-21   NR MCU1274230.1 2026791 g45064 i0 63 0.995901639344262 81 30 99.6 0 243 1 762 842 MCU1274230.1 hypothetical protein [Bryobacterales bacterium] diamond 243 96.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27828717 27828717 PRJNA1145997_P_NODE_37844_length_282_cov_1.784689_g35225_i0 PRJNA1145997 37844 282 1.784689 5.03282298 Terriglobia bacterium 2081523 Bacteria Bacteria 131 3.65e-33   NR HEY2382529.1 2081523 g35225 i0 72.4 5.5531914893617 87 24 92.6 0 282 22 822 908 HEY2382529.1 HAMP domain-containing protein [Terriglobia bacterium] diamond 1566 131 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
27955036 27955036 PRJNA1145997_P_NODE_46665_length_246_cov_0.901734_g44046_i0 PRJNA1145997 46665 246 0.901734 2.21826564 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 110 5.850000000000001e-26   NR HWB96333.1 2212468 g44046 i0 66.7 2 81 27 98.8 0 243 1 929 1009 HWB96333.1 carboxypeptidase regulatory-like domain-containing protein [Bryobacteraceae bacterium] diamond 492 110 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28081170 28081170 PRJNA1145997_P_NODE_23345_length_576_cov_5.000000_g20738_i0 PRJNA1145997 23345 576 5 28.8 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 335 1.5e-109   NR MCS6874538.1 2283092 g20738 i0 92.9 0.947916666666667 182 13 94.8 0 3 548 417 598 MCS6874538.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 546 335 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28397018 28397018 PRJNA1145997_P_NODE_47166_length_245_cov_0.906977_g44547_i0 PRJNA1145997 47166 245 0.906977 2.22209365 Acidobacteriota bacterium 1978231 Bacteria Bacteria 47.8 5.9e-4   NR MEY4635659.1 1978231 g44547 i0 35.3 1.04081632653061 85 49 98 3 4 243 50 133 MEY4635659.1 hypothetical protein [Acidobacteriota bacterium] diamond 255 47.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28523417 28523417 PRJNA1145997_P_NODE_27347_length_446_cov_3.463807_g24730_i0 PRJNA1145997 27347 446 3.463807 15.44857922 Acidobacteriota bacterium 1978231 Bacteria Bacteria 180 4.899999999999999e-56   NR MEW6360958.1 1978231 g24730 i0 98.8 0.57847533632287 86 1 57.8 0 23 280 1 86 MEW6360958.1 hypothetical protein [Acidobacteriota bacterium] diamond 258 180 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28744341 28744341 PRJNA1145997_P_NODE_47047_length_245_cov_0.906977_g44428_i0 PRJNA1145997 47047 245 0.906977 2.22209365 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 135 9.34e-35   NR MEO7653487.1 2212468 g44428 i0 77.8 1.98367346938776 81 18 99.2 0 3 245 149 229 MEO7653487.1 hypothetical protein [Bryobacteraceae bacterium] diamond 486 135 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28986080 28986080 PRJNA1145997_P_NODE_36288_length_295_cov_6.103604_g33669_i0 PRJNA1145997 36288 295 6.103604 18.0056318 Bacteria 2 Bacteria Bacteria 97.8 1.9900000000000003e-21   NR MDQ3042682.1 1978231 g33669 i0 62.4 1.92203389830508 93 33 94.6 2 280 2 104 194 MDQ3042682.1 Hpt domain-containing protein [Acidobacteriota bacterium] diamond 567 97.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29501978 29501978 PRJNA1145997_P_NODE_42530_length_253_cov_0.866667_g39911_i0 PRJNA1145997 42530 253 0.866667 2.19266751 Bryobacterales bacterium 2026791 Bacteria Bacteria 175 9.96e-49   NR MCC6365402.1 2026791 g39911 i0 94 1.94466403162055 83 5 98.4 0 253 5 574 656 MCC6365402.1 TonB-dependent receptor [Bryobacterales bacterium] diamond 492 175 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
29944316 29944316 PRJNA1145997_P_NODE_40871_length_261_cov_1.292553_g38252_i0 PRJNA1145997 40871 261 1.292553 3.37356333 Acidobacteriota bacterium 1978231 Bacteria Bacteria 157 3.92e-44   NR MBM3769403.1 1978231 g38252 i0 84.9 1.97701149425287 86 13 98.9 0 259 2 142 227 MBM3769403.1 DUF1553 domain-containing protein [Acidobacteriota bacterium] diamond 516 157 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29944321 29944321 PRJNA1145997_P_NODE_44491_length_249_cov_0.886364_g41872_i0 PRJNA1145997 44491 249 0.886364 2.20704636 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 150 2.5e-42   NR HEY8562917.1 2283092 g41872 i0 93.5 2.90361445783133 77 5 92.8 0 233 3 84 160 HEY8562917.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 723 150 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29975789 29975789 PRJNA1145997_P_NODE_47411_length_245_cov_0.906977_g44792_i0 PRJNA1145997 47411 245 0.906977 2.22209365 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 110 4.09e-26   NR HKE21946.1 2212468 g44792 i0 65.4 0.991836734693878 81 28 99.2 0 244 2 383 463 HKE21946.1 IPT/TIG domain-containing protein [Bryobacteraceae bacterium] diamond 243 110 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30101996 30101996 PRJNA1145997_P_NODE_42792_length_252_cov_0.871508_g40173_i0 PRJNA1145997 42792 252 0.871508 2.19620016 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 90.9 4.84e-19   NR MDE1163693.1 2052142 g40173 i0 68.1 0.857142857142857 72 21 85.7 1 252 37 55 124 MDE1163693.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 216 90.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30734039 30734039 PRJNA1145997_P_NODE_31834_length_352_cov_2.795699_g29215_i0 PRJNA1145997 31834 352 2.795699 9.84086048 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 132 3.98e-34   NR HEX4541861.1 3069120 g29215 i0 58.3 0.920454545454545 108 42 90.3 2 5 322 336 442 HEX4541861.1 hypothetical protein [Candidatus Acidiferrum sp.] diamond 324 132 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
31429335 31429335 PRJNA1145997_P_NODE_45836_length_247_cov_0.896552_g43217_i0 PRJNA1145997 45836 247 0.896552 2.21448344 Acidobacteriota bacterium 1978231 Bacteria Bacteria 164 2.39e-45   NR MCU1291014.1 1978231 g43217 i0 92.7 12.9473684210526 82 6 99.6 0 2 247 455 536 MCU1291014.1 arginine decarboxylase, biosynthetic [Acidobacteriota bacterium] diamond 3198 164 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31587712 31587712 PRJNA1145997_P_NODE_48536_length_243_cov_0.917647_g45917_i0 PRJNA1145997 48536 243 0.917647 2.22988221 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 83.6 2.39e-17   NR MEO8127403.1 2212468 g45917 i0 51.8 1.02469135802469 83 35 100 2 1 243 48 127 MEO8127403.1 NRDE family protein [Bryobacteraceae bacterium] diamond 249 83.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31714087 31714087 PRJNA1145997_P_NODE_27597_length_439_cov_4.248634_g24980_i0 PRJNA1145997 27597 439 4.248634 18.65150326 Acidobacteriota bacterium 1978231 Bacteria Bacteria 203 5.1899999999999995e-62   NR MEW6361080.1 1978231 g24980 i0 100 0.703872437357631 103 0 70.4 0 435 127 220 322 MEW6361080.1 hypothetical protein [Acidobacteriota bacterium] diamond 309 203 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31745597 31745597 PRJNA1145997_P_NODE_42357_length_253_cov_0.866667_g39738_i0 PRJNA1145997 42357 253 0.866667 2.19266751 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 153 6.66e-41   NR MBY0508155.1 2212468 g39738 i0 84.5 0.99604743083004 84 13 99.6 0 252 1 830 913 MBY0508155.1 TonB-dependent receptor [Bryobacteraceae bacterium] diamond 252 153 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32114367 32114367 PRJNA1145997_P_NODE_43898_length_250_cov_0.881356_g41279_i0 PRJNA1145997 43898 250 0.881356 2.20339 Bryobacter 911113 Bacteria Bacteria 103 7.66e-24   NR MCU0246716.1 1962911 g41279 i0 61.3 2.856 80 31 96 0 2 241 401 480 MCU0246716.1 HAMP domain-containing protein [Bryobacter sp.] diamond 714 104 0.990384615384615 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Bryobacter Bryobacter sp.
32252216 32252216 PRJNA1145997_P_NODE_28738_length_411_cov_4.017751_g26121_i0 PRJNA1145997 28738 411 4.017751 16.51295661 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 243 6.25e-72   NR MBX7053390.1 2283092 g26121 i0 89.5 0.970802919708029 133 14 97.1 0 7 405 675 807 MBX7053390.1 VCBS repeat-containing protein [Pyrinomonadaceae bacterium] diamond 399 243 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32714643 32714643 PRJNA1145997_P_NODE_44780_length_249_cov_0.886364_g42161_i0 PRJNA1145997 44780 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 116 3.4600000000000003e-29   NR MBL8229205.1 2026791 g42161 i0 68.9 1.91566265060241 74 23 89.2 0 4 225 73 146 MBL8229205.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Bryobacterales bacterium] diamond 477 116 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
32788568 32788568 PRJNA1145997_P_NODE_45220_length_248_cov_0.891429_g42601_i0 PRJNA1145997 45220 248 0.891429 2.21074392 Terriglobia bacterium 2081523 Bacteria Bacteria 67 1.14e-10   NR MDT8068229.1 2081523 g42601 i0 45.1 0.991935483870968 82 43 99.2 1 247 2 530 609 MDT8068229.1 NACHT domain-containing protein [Terriglobia bacterium] diamond 246 67 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;