RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1145997", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1145997 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13043082 13043082 PRJNA1145997_P_NODE_30111_length_382_cov_13.789644_g27493_i0 PRJNA1145997 30111 382 13.789644 52.67644008 Phycomyces blakesleeanus 4837 Fungi Fungi 206 2.6399999999999994e-48   NTclustered gi|1069960082|ref|XM_018429129.1| 763407 g27493 i0 82.278 42.5287958115183 237 42 62 0 96 332 251 15 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 16246 206 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
18141134 18141134 PRJNA1145997_P_NODE_31995_length_349_cov_4.590580_g29376_i0 PRJNA1145997 31995 349 4.59058 16.0211242 Radiomyces spectabilis 64574 Fungi Fungi 150 1.1399999999999999e-31   NTclustered gi|2323749157|ref|XM_051563707.1| 64574 g29376 i0 83.648 37.2893982808023 159 26 46 0 137 295 159 1 Radiomyces spectabilis ribosomal L29e protein family-domain-containing protein (BYT42DRAFT_482704), partial mRNA blastn 13014 150 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
26595481 26595481 PRJNA1145997_P_NODE_30701_length_371_cov_1.100671_g28082_i0 PRJNA1145997 30701 371 1.100671 4.08348941 Mucor circinelloides 1 36080 Fungi Fungi 59.3 2.21e-7   NR EPB90241.1 1220926 g28082 i0 34 1.55256064690027 97 62 78.4 2 295 5 28 122 EPB90241.1 hypothetical protein HMPREF1544_02927 [Mucor circinelloides 1006PhL] diamond 576 59.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor circinelloides
32694138 32694138 PRJNA1145997_P_NODE_23440_length_572_cov_14.230461_g20832_i0 PRJNA1145997 23440 572 14.230461 81.39823692 Rhizophagus irregularis 588596 Fungi Fungi 47.8 0.0124   NR XP_025185428.1 588596 g20832 i0 33.8 0.372377622377622 71 37 32 2 263 445 356 426 XP_025185428.1 uncharacterized protein OCT59_006909 [Rhizophagus irregularis] diamond 213 47.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;