RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1145997", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Gottesmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Gottesmaniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1145997 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28322711 28322711 PRJNA1145997_P_NODE_47066_length_245_cov_0.906977_g44447_i0 PRJNA1145997 47066 245 0.906977 2.22209365 Bacteria 2 Bacteria Bacteria 149 1.86e-41   NR KKU80952.1 1618438 g44447 i0 85.2 11.9020408163265 81 12 99.2 0 3 245 58 138 KKU80952.1 MAG: Acetyl-CoA synthetase [Candidatus Gottesmanbacteria bacterium GW2011_GWA1_47_8] diamond 2916 150 0.993333333333333 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium GW2011_GWA1_47_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;