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contig_metadata

3 rows where bioproject = "PRJNA1145574" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1145574 · 3 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27007129 27007129 PRJNA1145574_P_NODE_4862_length_381_cov_1.519481_g4678_i0 PRJNA1145574 4862 381 1.519481 5.78922261 Candidatus Pacearchaeota archaeon CG1_ 2026773 Archaea Archaea 45.8 0.0125   NR OIO41421.1 1805294 g4678 i0 33.3 0.874015748031496 111 63 87.4 6 345 13 175 274 OIO41421.1 MAG: hypothetical protein AUJ10_01015 [Candidatus Pacearchaeota archaeon CG1_02_31_27] diamond 333 45.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon CG1_02_31_27
30986948 30986948 PRJNA1145574_P_NODE_6634_length_334_cov_1.172414_g6450_i0 PRJNA1145574 6634 334 1.172414 3.91586276 archaeon 1906665 Archaea Archaea 99.4 1.59e-21   NR MCQ2815850.1 1906665 g6450 i0 44.1 0.997005988023952 111 61 99.7 1 333 1 2114 2223 MCQ2815850.1 hypothetical protein [archaeon] diamond 333 99.4 1 Archaea               archaeon
32030529 32030529 PRJNA1145574_P_NODE_14378_length_243_cov_0.917647_g14194_i0 PRJNA1145574 14378 243 0.917647 2.22988221 archaeon 1906665 Archaea Archaea 87.4 6.45e-19   NR MCQ2818700.1 1906665 g14194 i0 54.7 1.06172839506173 86 23 100 2 243 1 151 225 MCQ2818700.1 30S ribosomal protein S3 [archaeon] diamond 258 87.4 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;