contig_metadata
82 rows where bioproject = "PRJNA1145574" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 288609 | 288609 | PRJNA1145574_P_NODE_10481_length_261_cov_0.867021_g10297_i0 | PRJNA1145574 | 10481 | 261 | 0.867021 | 2.26292481 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 472 | 1.54e-128 | NTclustered | gi|972494020|gb|CP010483.1| | 197 | g10297 | i0 | 99.234 | 100 | 261 | 2 | 100 | 0 | 1 | 261 | 504580 | 504320 | Campylobacter jejuni strain CJ677CC535, complete genome | blastn | 26100 | 472 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 1033240 | 1033240 | PRJNA1145574_P_NODE_11781_length_251_cov_0.876404_g11597_i0 | PRJNA1145574 | 11781 | 251 | 0.876404 | 2.19977404 | Campylobacter | 194 | Bacteria | Bacteria | 459 | 1.1499999999999996e-124 | NTclustered | gi|2473671727|gb|CP047214.1| | 195 | g11597 | i0 | 99.602 | 100 | 251 | 1 | 100 | 0 | 1 | 251 | 376290 | 376540 | Campylobacter coli strain QL_1_15 chromosome, complete genome | blastn | 25100 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 1033289 | 1033289 | PRJNA1145574_P_NODE_8501_length_295_cov_1.054054_g8317_i0 | PRJNA1145574 | 8501 | 295 | 1.054054 | 3.1094593 | Campylobacter | 194 | Bacteria | Bacteria | 545 | 1.03e-150 | NTclustered | gi|2703143930|gb|CP148158.1| | 197 | g8317 | i0 | 100 | 100 | 295 | 0 | 100 | 0 | 1 | 295 | 446856 | 447150 | Campylobacter jejuni strain Z1323HCJ0054 chromosome, complete genome | blastn | 29500 | 545 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 1033293 | 1033293 | PRJNA1145574_P_NODE_9921_length_271_cov_1.181818_g9737_i0 | PRJNA1145574 | 9921 | 271 | 1.181818 | 3.20272678 | Campylobacter | 194 | Bacteria | Bacteria | 501 | 2.05e-137 | NTclustered | gi|2703220886|gb|CP148181.1| | 197 | g9737 | i0 | 100 | 100 | 271 | 0 | 100 | 0 | 1 | 271 | 1397294 | 1397564 | Campylobacter jejuni strain Z1323CCJ0101 chromosome, complete genome | blastn | 27100 | 501 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 1563358 | 1563358 | PRJNA1145574_P_NODE_6742_length_332_cov_0.903475_g6558_i0 | PRJNA1145574 | 6742 | 332 | 0.903475 | 2.999537 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 608 | 1.479999999999999e-169 | NTclustered | gi|1829617497|gb|CP048761.1| | 197 | g6558 | i0 | 99.699 | 47.210843373494 | 332 | 1 | 100 | 0 | 1 | 332 | 1404141 | 1404472 | Campylobacter jejuni strain ZS004 chromosome, complete genome | blastn | 15674 | 608 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 2308575 | 2308575 | PRJNA1145574_P_NODE_11902_length_251_cov_0.876404_g11718_i0 | PRJNA1145574 | 11902 | 251 | 0.876404 | 2.19977404 | Campylobacter | 194 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2877870896|gb|CP125739.1| | 197 | g11718 | i0 | 100 | 100 | 251 | 0 | 100 | 0 | 1 | 251 | 201270 | 201520 | Campylobacter jejuni strain MS2202 chromosome, complete genome | blastn | 25100 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 2308604 | 2308604 | PRJNA1145574_P_NODE_4642_length_389_cov_0.905063_g4458_i0 | PRJNA1145574 | 4642 | 389 | 0.905063 | 3.52069507 | Campylobacter | 194 | Bacteria | Bacteria | 713 | 0 | NTclustered | gi|943353927|gb|CP013034.1| | 195 | g4458 | i0 | 99.743 | 100.994858611825 | 389 | 1 | 100 | 0 | 1 | 389 | 1594802 | 1594414 | Campylobacter coli strain HC2-48, complete genome | blastn | 39287 | 713 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 2308611 | 2308611 | PRJNA1145574_P_NODE_5842_length_353_cov_0.914286_g5658_i0 | PRJNA1145574 | 5842 | 353 | 0.914286 | 3.22742958 | Campylobacter | 194 | Bacteria | Bacteria | 619 | 7.299999999999999e-173 | NTclustered | gi|2151052516|gb|CP086657.1| | 195 | g5658 | i0 | 98.3 | 100.269121813031 | 353 | 6 | 100 | 0 | 1 | 353 | 1453903 | 1453551 | Campylobacter coli strain P4581 chromosome, complete genome | blastn | 35395 | 619 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 2308625 | 2308625 | PRJNA1145574_P_NODE_7162_length_323_cov_0.808000_g6978_i0 | PRJNA1145574 | 7162 | 323 | 0.808 | 2.60984 | Campylobacter | 194 | Bacteria | Bacteria | 580 | 3.129999999999999e-161 | NTclustered | gi|2794595739|gb|CP126350.1| | 195 | g6978 | i0 | 99.071 | 99.5386996904025 | 323 | 3 | 100 | 0 | 1 | 323 | 321185 | 320863 | Campylobacter coli strain BfR-CA-16258 chromosome, complete genome | blastn | 32151 | 580 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 2839471 | 2839471 | PRJNA1145574_P_NODE_12863_length_248_cov_0.891429_g12679_i0 | PRJNA1145574 | 12863 | 248 | 0.891429 | 2.21074392 | Campylobacter sp. CFSAN093224 | 2572074 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|1835278483|gb|CP040607.1| | 2572074 | g12679 | i0 | 100 | 100 | 248 | 0 | 100 | 0 | 1 | 248 | 855374 | 855127 | Campylobacter sp. CFSAN093224 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CFSAN093224 | ||
| 2839494 | 2839494 | PRJNA1145574_P_NODE_14763_length_242_cov_0.923077_g14579_i0 | PRJNA1145574 | 14763 | 242 | 0.923077 | 2.23384634 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1626698542|gb|CP032522.1| | 197 | g14579 | i0 | 100 | 101 | 242 | 0 | 100 | 0 | 1 | 242 | 79844 | 79603 | Campylobacter jejuni strain BC chromosome, complete genome | blastn | 24442 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 3583727 | 3583727 | PRJNA1145574_P_NODE_11883_length_251_cov_0.876404_g11699_i0 | PRJNA1145574 | 11883 | 251 | 0.876404 | 2.19977404 | Campylobacter | 194 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g11699 | i0 | 100 | 100 | 251 | 0 | 100 | 0 | 1 | 251 | 1191331 | 1191581 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 25100 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 3583734 | 3583734 | PRJNA1145574_P_NODE_12683_length_248_cov_0.891429_g12499_i0 | PRJNA1145574 | 12683 | 248 | 0.891429 | 2.21074392 | Campylobacter | 194 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|1950122130|gb|CP066486.1| | 195 | g12499 | i0 | 100 | 100 | 248 | 0 | 100 | 0 | 1 | 248 | 1659474 | 1659227 | Campylobacter coli strain PSU-31 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 4115654 | 4115654 | PRJNA1145574_P_NODE_11484_length_252_cov_0.871508_g11300_i0 | PRJNA1145574 | 11484 | 252 | 0.871508 | 2.19620016 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2253014499|dbj|AP026009.1| | 197 | g11300 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 886372 | 886121 | Campylobacter jejuni THJ111 DNA, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4861336 | 4861336 | PRJNA1145574_P_NODE_10844_length_254_cov_1.292818_g10660_i0 | PRJNA1145574 | 10844 | 254 | 1.292818 | 3.28375772 | Campylobacter | 194 | Bacteria | Bacteria | 470 | 5.37e-128 | NTclustered | gi|1887121882|gb|CP059971.1| | 197 | g10660 | i0 | 100 | 100 | 254 | 0 | 100 | 0 | 1 | 254 | 982733 | 982986 | Campylobacter jejuni strain C34 chromosome, complete genome | blastn | 25400 | 470 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4861341 | 4861341 | PRJNA1145574_P_NODE_11564_length_252_cov_0.871508_g11380_i0 | PRJNA1145574 | 11564 | 252 | 0.871508 | 2.19620016 | Campylobacter | 194 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1887121882|gb|CP059971.1| | 197 | g11380 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 919340 | 919089 | Campylobacter jejuni strain C34 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4861356 | 4861356 | PRJNA1145574_P_NODE_14924_length_242_cov_0.923077_g14740_i0 | PRJNA1145574 | 14924 | 242 | 0.923077 | 2.23384634 | Campylobacter | 194 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g14740 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 1256911 | 1256670 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4861373 | 4861373 | PRJNA1145574_P_NODE_4804_length_383_cov_1.409677_g4620_i0 | PRJNA1145574 | 4804 | 383 | 1.409677 | 5.39906291 | Campylobacter | 194 | Bacteria | Bacteria | 401 | 3.149999999999999e-107 | NTclustered | gi|1061031979|gb|CP017025.1| | 195 | g4620 | i0 | 97.854 | 66.4281984334204 | 233 | 4 | 61 | 1 | 152 | 383 | 297195 | 297427 | Campylobacter coli strain 14983A, complete genome | blastn | 25442 | 401 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 4861396 | 4861396 | PRJNA1145574_P_NODE_9284_length_282_cov_1.119617_g9100_i0 | PRJNA1145574 | 9284 | 282 | 1.119617 | 3.15731994 | Campylobacter | 194 | Bacteria | Bacteria | 521 | 1.6499999999999996e-143 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g9100 | i0 | 100 | 247 | 282 | 0 | 100 | 0 | 1 | 282 | 41828 | 42109 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 69654 | 521 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 6136107 | 6136107 | PRJNA1145574_P_NODE_10365_length_263_cov_1.200000_g10181_i0 | PRJNA1145574 | 10365 | 263 | 1.2 | 3.156 | Campylobacter | 194 | Bacteria | Bacteria | 481 | 2.58e-131 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g10181 | i0 | 99.62 | 100 | 263 | 1 | 100 | 0 | 1 | 263 | 1498488 | 1498750 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 26300 | 481 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 6136122 | 6136122 | PRJNA1145574_P_NODE_13225_length_247_cov_0.896552_g13041_i0 | PRJNA1145574 | 13225 | 247 | 0.896552 | 2.21448344 | Campylobacter | 194 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g13041 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 57145 | 57391 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 24700 | 457 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 6136131 | 6136131 | PRJNA1145574_P_NODE_2405_length_528_cov_1.200000_g2223_i0 | PRJNA1145574 | 2405 | 528 | 1.2 | 6.336 | Campylobacter | 194 | Bacteria | Bacteria | 976 | 0 | NTclustered | gi|1887117065|gb|CP059967.1| | 197 | g2223 | i0 | 100 | 100 | 528 | 0 | 100 | 0 | 1 | 528 | 3992 | 3465 | Campylobacter jejuni strain C201 chromosome, complete genome | blastn | 52800 | 976 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 6136155 | 6136155 | PRJNA1145574_P_NODE_6785_length_331_cov_1.116279_g6601_i0 | PRJNA1145574 | 6785 | 331 | 1.116279 | 3.69488349 | Campylobacter | 194 | Bacteria | Bacteria | 606 | 5.299999999999998e-169 | NTclustered | gi|1887121882|gb|CP059971.1| | 197 | g6601 | i0 | 99.698 | 100 | 331 | 1 | 100 | 0 | 1 | 331 | 1156967 | 1156637 | Campylobacter jejuni strain C34 chromosome, complete genome | blastn | 33100 | 606 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 6136158 | 6136158 | PRJNA1145574_P_NODE_6965_length_327_cov_0.921260_g6781_i0 | PRJNA1145574 | 6965 | 327 | 0.92126 | 3.0125202 | Campylobacter | 194 | Bacteria | Bacteria | 599 | 8.759999999999997e-167 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g6781 | i0 | 99.695 | 100.305810397554 | 328 | 0 | 100 | 1 | 1 | 327 | 827189 | 826862 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 32800 | 599 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 6136163 | 6136163 | PRJNA1145574_P_NODE_7765_length_310_cov_1.645570_g7581_i0 | PRJNA1145574 | 7765 | 310 | 1.64557 | 5.101267 | Campylobacter | 194 | Bacteria | Bacteria | 573 | 4.999999999999998e-159 | NTclustered | gi|2637568290|gb|CP140394.1| | 197 | g7581 | i0 | 100 | 100 | 310 | 0 | 100 | 0 | 1 | 310 | 376725 | 376416 | Campylobacter jejuni strain PNUSAC039265 chromosome, complete genome | blastn | 31000 | 573 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 6666556 | 6666556 | PRJNA1145574_P_NODE_13946_length_245_cov_0.906977_g13762_i0 | PRJNA1145574 | 13946 | 245 | 0.906977 | 2.22209365 | Campylobacter coli | 195 | Bacteria | Bacteria | 424 | 4.07e-114 | NTclustered | gi|557228|emb|X82079.1| | 195 | g13762 | i0 | 97.959 | 75.9469387755102 | 245 | 3 | 100 | 2 | 1 | 245 | 2868 | 3110 | C.coli plasmid pCCT1 DNA | blastn | 18607 | 424 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 7411143 | 7411143 | PRJNA1145574_P_NODE_11526_length_252_cov_0.871508_g11342_i0 | PRJNA1145574 | 11526 | 252 | 0.871508 | 2.19620016 | Campylobacter | 194 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g11342 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 887527 | 887276 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 7411146 | 7411146 | PRJNA1145574_P_NODE_12566_length_249_cov_0.886364_g12382_i0 | PRJNA1145574 | 12566 | 249 | 0.886364 | 2.20704636 | Campylobacter | 194 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g12382 | i0 | 100 | 100 | 249 | 0 | 100 | 0 | 1 | 249 | 364670 | 364918 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 24900 | 460 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 7411153 | 7411153 | PRJNA1145574_P_NODE_14546_length_243_cov_0.917647_g14362_i0 | PRJNA1145574 | 14546 | 243 | 0.917647 | 2.22988221 | Campylobacter | 194 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g14362 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 1370819 | 1371061 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 7411200 | 7411200 | PRJNA1145574_P_NODE_9626_length_276_cov_1.133005_g9442_i0 | PRJNA1145574 | 9626 | 276 | 1.133005 | 3.1270938 | Campylobacter | 194 | Bacteria | Bacteria | 510 | 3.48e-140 | NTclustered | gi|2523941679|dbj|AP028332.1| | 197 | g9442 | i0 | 100 | 100 | 276 | 0 | 100 | 0 | 1 | 276 | 920953 | 920678 | Campylobacter jejuni BCH-10155 DNA, complete genome | blastn | 27600 | 510 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 8686408 | 8686408 | PRJNA1145574_P_NODE_3427_length_442_cov_1.691057_g3243_i0 | PRJNA1145574 | 3427 | 442 | 1.691057 | 7.47447194 | Campylobacter | 194 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|1654268075|gb|CP040241.1| | 195 | g3243 | i0 | 98.643 | 40.1968325791855 | 442 | 6 | 100 | 0 | 1 | 442 | 2806 | 3247 | Campylobacter coli strain S9 plasmid pCcS9_2, complete sequence | blastn | 17767 | 784 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 8686435 | 8686435 | PRJNA1145574_P_NODE_8407_length_297_cov_1.044643_g8223_i0 | PRJNA1145574 | 8407 | 297 | 1.044643 | 3.10258971 | Campylobacter | 194 | Bacteria | Bacteria | 549 | 8.029999999999997e-152 | NTclustered | gi|2030395107|gb|CP068586.1| | 195 | g8223 | i0 | 100 | 100 | 297 | 0 | 100 | 0 | 1 | 297 | 615873 | 616169 | Campylobacter coli strain CC19CH076 chromosome, complete genome | blastn | 29700 | 549 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 9216654 | 9216654 | PRJNA1145574_P_NODE_11128_length_253_cov_0.866667_g10944_i0 | PRJNA1145574 | 11128 | 253 | 0.866667 | 2.19266751 | Campylobacter sp. CFSAN093224 | 2572074 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1835278483|gb|CP040607.1| | 2572074 | g10944 | i0 | 100 | 100 | 253 | 0 | 100 | 0 | 1 | 253 | 105890 | 105638 | Campylobacter sp. CFSAN093224 chromosome, complete genome | blastn | 25300 | 468 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. CFSAN093224 | ||
| 9961413 | 9961413 | PRJNA1145574_P_NODE_12348_length_249_cov_0.886364_g12164_i0 | PRJNA1145574 | 12348 | 249 | 0.886364 | 2.20704636 | Campylobacter | 194 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2806410320|gb|CP169458.1| | 195 | g12164 | i0 | 100 | 99.9357429718875 | 249 | 0 | 100 | 0 | 1 | 249 | 1030994 | 1031242 | Campylobacter coli strain CVM N17C264 chromosome, complete genome | blastn | 24884 | 460 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 9961426 | 9961426 | PRJNA1145574_P_NODE_14488_length_243_cov_0.917647_g14304_i0 | PRJNA1145574 | 14488 | 243 | 0.917647 | 2.22988221 | Campylobacter | 194 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g14304 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 83137 | 83379 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 9961434 | 9961434 | PRJNA1145574_P_NODE_4568_length_392_cov_0.768025_g4384_i0 | PRJNA1145574 | 4568 | 392 | 0.768025 | 3.010658 | Campylobacter | 194 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|2523943522|dbj|AP028334.1| | 197 | g4384 | i0 | 98.977 | 99.7448979591837 | 391 | 4 | 99 | 0 | 2 | 392 | 521005 | 520615 | Campylobacter jejuni BCH-10172 DNA, complete genome | blastn | 39100 | 701 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 11236562 | 11236562 | PRJNA1145574_P_NODE_14909_length_242_cov_0.923077_g14725_i0 | PRJNA1145574 | 14909 | 242 | 0.923077 | 2.23384634 | Campylobacter | 194 | Bacteria | Bacteria | 446 | 8.559999999999998e-121 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g14725 | i0 | 100 | 99.5867768595041 | 241 | 0 | 99 | 0 | 1 | 241 | 1507932 | 1507692 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 24100 | 446 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 11236584 | 11236584 | PRJNA1145574_P_NODE_7249_length_321_cov_0.943548_g7065_i0 | PRJNA1145574 | 7249 | 321 | 0.943548 | 3.02878908 | Campylobacter | 194 | Bacteria | Bacteria | 593 | 3.9899999999999986e-165 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g7065 | i0 | 100 | 100 | 321 | 0 | 100 | 0 | 1 | 321 | 1612354 | 1612034 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 32100 | 593 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 11767293 | 11767293 | PRJNA1145574_P_NODE_14070_length_244_cov_0.912281_g13886_i0 | PRJNA1145574 | 14070 | 244 | 0.912281 | 2.22596564 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|972494020|gb|CP010483.1| | 197 | g13886 | i0 | 100 | 100 | 244 | 0 | 100 | 0 | 1 | 244 | 1103240 | 1102997 | Campylobacter jejuni strain CJ677CC535, complete genome | blastn | 24400 | 451 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 11767363 | 11767363 | PRJNA1145574_P_NODE_7690_length_312_cov_1.305439_g7506_i0 | PRJNA1145574 | 7690 | 312 | 1.305439 | 4.07296968 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 577 | 3.89e-160 | NTclustered | gi|1859914723|gb|CP054848.1| | 197 | g7506 | i0 | 100 | 100 | 312 | 0 | 100 | 0 | 1 | 312 | 1401513 | 1401824 | Campylobacter jejuni strain BfR-CA-12970 chromosome | blastn | 31200 | 577 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 12511942 | 12511942 | PRJNA1145574_P_NODE_13410_length_246_cov_0.901734_g13226_i0 | PRJNA1145574 | 13410 | 246 | 0.901734 | 2.21826564 | Campylobacter | 194 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2265220479|gb|CP029053.1| | 197 | g13226 | i0 | 100 | 100 | 246 | 0 | 100 | 0 | 1 | 246 | 315524 | 315769 | Campylobacter jejuni strain c021 chromosome, complete genome | blastn | 24600 | 455 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 12511953 | 12511953 | PRJNA1145574_P_NODE_14950_length_242_cov_0.923077_g14766_i0 | PRJNA1145574 | 14950 | 242 | 0.923077 | 2.23384634 | Campylobacter | 194 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g14766 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 1325347 | 1325106 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 12511963 | 12511963 | PRJNA1145574_P_NODE_3210_length_455_cov_1.143979_g3026_i0 | PRJNA1145574 | 3210 | 455 | 1.143979 | 5.20510445 | Campylobacter | 194 | Bacteria | Bacteria | 830 | 0 | NTclustered | gi|2703143930|gb|CP148158.1| | 197 | g3026 | i0 | 99.56 | 100 | 455 | 2 | 100 | 0 | 1 | 455 | 1582480 | 1582934 | Campylobacter jejuni strain Z1323HCJ0054 chromosome, complete genome | blastn | 45500 | 830 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 12511979 | 12511979 | PRJNA1145574_P_NODE_6290_length_342_cov_0.869888_g6106_i0 | PRJNA1145574 | 6290 | 342 | 0.869888 | 2.97501696 | Campylobacter | 194 | Bacteria | Bacteria | 632 | 9.079999999999999e-177 | NTclustered | gi|2524008911|dbj|AP028386.1| | 197 | g6106 | i0 | 100 | 100 | 342 | 0 | 100 | 0 | 1 | 342 | 457434 | 457093 | Campylobacter jejuni BCH-11348 DNA, complete genome | blastn | 34200 | 632 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 13786613 | 13786613 | PRJNA1145574_P_NODE_10031_length_269_cov_1.193878_g9847_i0 | PRJNA1145574 | 10031 | 269 | 1.193878 | 3.21153182 | Campylobacter | 194 | Bacteria | Bacteria | 490 | 4.409999999999999e-134 | NTclustered | gi|2524034182|dbj|AP028408.1| | 197 | g9847 | i0 | 99.627 | 8.07434944237918 | 268 | 1 | 99 | 0 | 1 | 268 | 1382317 | 1382050 | Campylobacter jejuni IDH-11860 DNA, complete genome | blastn | 2172 | 490 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 13786625 | 13786625 | PRJNA1145574_P_NODE_11471_length_252_cov_0.871508_g11287_i0 | PRJNA1145574 | 11471 | 252 | 0.871508 | 2.19620016 | root | 1 | Root_unresolved | Root_unresolved | 466 | 6.89e-127 | NTclustered | gi|2794627034|gb|CP126368.1| | 195 | g11287 | i0 | 100 | 105 | 252 | 0 | 100 | 0 | 1 | 252 | 37818 | 37567 | Campylobacter coli strain BfR-CA-15687 plasmid pBfR-CA-15687, complete sequence | blastn | 26460 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 13786636 | 13786636 | PRJNA1145574_P_NODE_14191_length_244_cov_0.912281_g14007_i0 | PRJNA1145574 | 14191 | 244 | 0.912281 | 2.22596564 | Campylobacter | 194 | Bacteria | Bacteria | 446 | 8.639999999999999e-121 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g14007 | i0 | 99.59 | 100 | 244 | 1 | 100 | 0 | 1 | 244 | 1675358 | 1675601 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 24400 | 446 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 15061005 | 15061005 | PRJNA1145574_P_NODE_11012_length_253_cov_0.866667_g10828_i0 | PRJNA1145574 | 11012 | 253 | 0.866667 | 2.19266751 | Campylobacter | 194 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|2252976028|dbj|AP025966.1| | 197 | g10828 | i0 | 100 | 100 | 253 | 0 | 100 | 0 | 1 | 253 | 114491 | 114743 | Campylobacter jejuni THJ022 DNA, complete genome | blastn | 25300 | 468 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 15061062 | 15061062 | PRJNA1145574_P_NODE_8932_length_288_cov_0.953488_g8748_i0 | PRJNA1145574 | 8932 | 288 | 0.953488 | 2.74604544 | Campylobacter | 194 | Bacteria | Bacteria | 521 | 1.69e-143 | NTclustered | gi|2252976028|dbj|AP025966.1| | 197 | g8748 | i0 | 99.306 | 100 | 288 | 2 | 100 | 0 | 1 | 288 | 721319 | 721032 | Campylobacter jejuni THJ022 DNA, complete genome | blastn | 28800 | 521 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16335697 | 16335697 | PRJNA1145574_P_NODE_12773_length_248_cov_0.891429_g12589_i0 | PRJNA1145574 | 12773 | 248 | 0.891429 | 2.21074392 | Campylobacter | 194 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2703143930|gb|CP148158.1| | 197 | g12589 | i0 | 100 | 100 | 248 | 0 | 100 | 0 | 1 | 248 | 487890 | 487643 | Campylobacter jejuni strain Z1323HCJ0054 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16335698 | 16335698 | PRJNA1145574_P_NODE_12813_length_248_cov_0.891429_g12629_i0 | PRJNA1145574 | 12813 | 248 | 0.891429 | 2.21074392 | Campylobacter | 194 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2703143930|gb|CP148158.1| | 197 | g12629 | i0 | 100 | 100 | 248 | 0 | 100 | 0 | 1 | 248 | 652435 | 652188 | Campylobacter jejuni strain Z1323HCJ0054 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16335702 | 16335702 | PRJNA1145574_P_NODE_13833_length_245_cov_0.906977_g13649_i0 | PRJNA1145574 | 13833 | 245 | 0.906977 | 2.22209365 | Campylobacter | 194 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2703143930|gb|CP148158.1| | 197 | g13649 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 659610 | 659854 | Campylobacter jejuni strain Z1323HCJ0054 chromosome, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16335754 | 16335754 | PRJNA1145574_P_NODE_9533_length_277_cov_1.725490_g9349_i0 | PRJNA1145574 | 9533 | 277 | 1.72549 | 4.7796073 | Campylobacter | 194 | Bacteria | Bacteria | 512 | 9.73e-141 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g9349 | i0 | 100 | 100 | 277 | 0 | 100 | 0 | 1 | 277 | 1431853 | 1431577 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 27700 | 512 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16865747 | 16865747 | PRJNA1145574_P_NODE_11134_length_253_cov_0.866667_g10950_i0 | PRJNA1145574 | 11134 | 253 | 0.866667 | 2.19266751 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1829627864|gb|CP048769.1| | 197 | g10950 | i0 | 100 | 23 | 253 | 0 | 100 | 0 | 1 | 253 | 513073 | 513325 | Campylobacter jejuni strain ZJB020 chromosome, complete genome | blastn | 5819 | 468 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16865789 | 16865789 | PRJNA1145574_P_NODE_13554_length_246_cov_0.901734_g13370_i0 | PRJNA1145574 | 13554 | 246 | 0.901734 | 2.21826564 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g13370 | i0 | 100 | 100.609756097561 | 246 | 0 | 100 | 0 | 1 | 246 | 184415 | 184660 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 24750 | 455 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 16865800 | 16865800 | PRJNA1145574_P_NODE_14434_length_243_cov_0.917647_g14250_i0 | PRJNA1145574 | 14434 | 243 | 0.917647 | 2.22988221 | Campylobacter coli | 195 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2030387999|gb|CP068565.1| | 195 | g14250 | i0 | 100 | 101.057613168724 | 243 | 0 | 100 | 0 | 1 | 243 | 139509 | 139751 | Campylobacter coli strain CC19DZ036 chromosome, complete genome | blastn | 24557 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 17610930 | 17610930 | PRJNA1145574_P_NODE_11554_length_252_cov_0.871508_g11370_i0 | PRJNA1145574 | 11554 | 252 | 0.871508 | 2.19620016 | Campylobacter | 194 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g11370 | i0 | 100 | 101 | 252 | 0 | 100 | 0 | 1 | 252 | 326940 | 326689 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 25452 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 17610932 | 17610932 | PRJNA1145574_P_NODE_11854_length_251_cov_0.876404_g11670_i0 | PRJNA1145574 | 11854 | 251 | 0.876404 | 2.19977404 | Campylobacter | 194 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1887121882|gb|CP059971.1| | 197 | g11670 | i0 | 100 | 100 | 251 | 0 | 100 | 0 | 1 | 251 | 409246 | 409496 | Campylobacter jejuni strain C34 chromosome, complete genome | blastn | 25100 | 464 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 17610938 | 17610938 | PRJNA1145574_P_NODE_13714_length_245_cov_0.906977_g13530_i0 | PRJNA1145574 | 13714 | 245 | 0.906977 | 2.22209365 | Campylobacter | 194 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g13530 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 1572834 | 1572590 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 17610941 | 17610941 | PRJNA1145574_P_NODE_14154_length_244_cov_0.912281_g13970_i0 | PRJNA1145574 | 14154 | 244 | 0.912281 | 2.22596564 | Campylobacter | 194 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2703220886|gb|CP148181.1| | 197 | g13970 | i0 | 100 | 100 | 244 | 0 | 100 | 0 | 1 | 244 | 1520422 | 1520665 | Campylobacter jejuni strain Z1323CCJ0101 chromosome, complete genome | blastn | 24400 | 451 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 17610945 | 17610945 | PRJNA1145574_P_NODE_14754_length_242_cov_0.923077_g14570_i0 | PRJNA1145574 | 14754 | 242 | 0.923077 | 2.23384634 | Campylobacter | 194 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g14570 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 829339 | 829580 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 17610977 | 17610977 | PRJNA1145574_P_NODE_7774_length_310_cov_1.316456_g7590_i0 | PRJNA1145574 | 7774 | 310 | 1.316456 | 4.0810136 | Campylobacter | 194 | Bacteria | Bacteria | 573 | 4.999999999999998e-159 | NTclustered | gi|2524030687|dbj|AP028404.1| | 195 | g7590 | i0 | 100 | 100 | 310 | 0 | 100 | 0 | 1 | 310 | 134115 | 134424 | Campylobacter coli BCH-11568 DNA, complete genome | blastn | 31000 | 573 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 18884845 | 18884845 | PRJNA1145574_P_NODE_12315_length_249_cov_1.000000_g12131_i0 | PRJNA1145574 | 12315 | 249 | 1 | 2.49 | Campylobacter | 194 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g12131 | i0 | 99.598 | 287.04016064257 | 249 | 1 | 100 | 0 | 1 | 249 | 351071 | 351319 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 71473 | 455 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 18884846 | 18884846 | PRJNA1145574_P_NODE_13295_length_247_cov_0.896552_g13111_i0 | PRJNA1145574 | 13295 | 247 | 0.896552 | 2.21448344 | Campylobacter | 194 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g13111 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 820175 | 819929 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 24700 | 457 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 18884851 | 18884851 | PRJNA1145574_P_NODE_14195_length_244_cov_0.912281_g14011_i0 | PRJNA1145574 | 14195 | 244 | 0.912281 | 2.22596564 | Campylobacter | 194 | Bacteria | Bacteria | 444 | 3.11e-120 | NTclustered | gi|2303633038|gb|CP012215.1| | 197 | g14011 | i0 | 100 | 98.3606557377049 | 240 | 0 | 98 | 0 | 1 | 240 | 26504 | 26743 | Campylobacter jejuni strain CJ518CC45, complete genome | blastn | 24000 | 444 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 18884854 | 18884854 | PRJNA1145574_P_NODE_14495_length_243_cov_0.917647_g14311_i0 | PRJNA1145574 | 14495 | 243 | 0.917647 | 2.22988221 | Campylobacter | 194 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|943353927|gb|CP013034.1| | 195 | g14311 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 1592988 | 1592746 | Campylobacter coli strain HC2-48, complete genome | blastn | 24300 | 449 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 19414701 | 19414701 | PRJNA1145574_P_NODE_12796_length_248_cov_0.891429_g12612_i0 | PRJNA1145574 | 12796 | 248 | 0.891429 | 2.21074392 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 425 | 1.15e-114 | NTclustered | gi|1626698542|gb|CP032522.1| | 197 | g12612 | i0 | 97.581 | 100 | 248 | 6 | 100 | 0 | 1 | 248 | 1404887 | 1405134 | Campylobacter jejuni strain BC chromosome, complete genome | blastn | 24800 | 425 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 20159651 | 20159651 | PRJNA1145574_P_NODE_10096_length_268_cov_1.200000_g9912_i0 | PRJNA1145574 | 10096 | 268 | 1.2 | 3.216 | Campylobacter | 194 | Bacteria | Bacteria | 496 | 9.429999999999999e-136 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g9912 | i0 | 100 | 100 | 268 | 0 | 100 | 0 | 1 | 268 | 1488127 | 1488394 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 26800 | 496 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 20159661 | 20159661 | PRJNA1145574_P_NODE_12056_length_250_cov_0.881356_g11872_i0 | PRJNA1145574 | 12056 | 250 | 0.881356 | 2.20339 | Campylobacter | 194 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1373207395|gb|CP028187.1| | 195 | g11872 | i0 | 100 | 135.044 | 250 | 0 | 100 | 0 | 1 | 250 | 1151362 | 1151611 | Campylobacter coli strain CFSAN054106 chromosome, complete genome | blastn | 33761 | 462 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 20159676 | 20159676 | PRJNA1145574_P_NODE_14876_length_242_cov_0.923077_g14692_i0 | PRJNA1145574 | 14876 | 242 | 0.923077 | 2.23384634 | Campylobacter | 194 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2523938275|dbj|AP028330.1| | 197 | g14692 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 15568 | 15327 | Campylobacter jejuni BCH-10089 DNA, complete genome | blastn | 24200 | 448 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 20159684 | 20159684 | PRJNA1145574_P_NODE_4096_length_410_cov_1.605341_g3912_i0 | PRJNA1145574 | 4096 | 410 | 1.605341 | 6.5818981 | Campylobacter | 194 | Bacteria | Bacteria | 758 | 0 | NTclustered | gi|1100599896|gb|CP017859.1| | 197 | g3912 | i0 | 100 | 100 | 410 | 0 | 100 | 0 | 1 | 410 | 365961 | 366370 | Campylobacter jejuni strain YQ2210, complete genome | blastn | 41000 | 758 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 20690085 | 20690085 | PRJNA1145574_P_NODE_10697_length_257_cov_1.135870_g10513_i0 | PRJNA1145574 | 10697 | 257 | 1.13587 | 2.9191859 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 246 | 9.99e-61 | NTclustered | gi|2507107202|gb|CP125388.1| | 197 | g10513 | i0 | 100 | 51.4513618677043 | 133 | 0 | 52 | 0 | 1 | 133 | 1145081 | 1145213 | Campylobacter jejuni strain SKBC25 chromosome, complete genome | blastn | 13223 | 246 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 21965476 | 21965476 | PRJNA1145574_P_NODE_14198_length_244_cov_0.912281_g14014_i0 | PRJNA1145574 | 14198 | 244 | 0.912281 | 2.22596564 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 446 | 8.639999999999999e-121 | NTclustered | gi|2794597454|gb|CP126369.1| | 197 | g14014 | i0 | 99.59 | 101 | 244 | 1 | 100 | 0 | 1 | 244 | 221249 | 221006 | Campylobacter jejuni strain BfR-CA-16088 chromosome, complete genome | blastn | 24644 | 446 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 22710174 | 22710174 | PRJNA1145574_P_NODE_11558_length_252_cov_0.871508_g11374_i0 | PRJNA1145574 | 11558 | 252 | 0.871508 | 2.19620016 | Campylobacter | 194 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1835528255|gb|CP047477.1| | 197 | g11374 | i0 | 100 | 100 | 252 | 0 | 100 | 0 | 1 | 252 | 58219 | 57968 | Campylobacter jejuni strain CFSAN096307 chromosome, complete genome | blastn | 25200 | 466 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 22710183 | 22710183 | PRJNA1145574_P_NODE_13598_length_246_cov_0.901734_g13414_i0 | PRJNA1145574 | 13598 | 246 | 0.901734 | 2.21826564 | Campylobacter | 194 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1859914723|gb|CP054848.1| | 197 | g13414 | i0 | 100 | 99.5243902439024 | 246 | 0 | 100 | 0 | 1 | 246 | 70158 | 69913 | Campylobacter jejuni strain BfR-CA-12970 chromosome | blastn | 24483 | 455 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 22710203 | 22710203 | PRJNA1145574_P_NODE_4318_length_401_cov_0.920732_g4134_i0 | PRJNA1145574 | 4318 | 401 | 0.920732 | 3.69213532 | Campylobacter | 194 | Bacteria | Bacteria | 741 | 0 | NTclustered | gi|2703220886|gb|CP148181.1| | 197 | g4134 | i0 | 100 | 100 | 401 | 0 | 100 | 0 | 1 | 401 | 1124886 | 1124486 | Campylobacter jejuni strain Z1323CCJ0101 chromosome, complete genome | blastn | 40100 | 741 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 23985528 | 23985528 | PRJNA1145574_P_NODE_12699_length_248_cov_0.891429_g12515_i0 | PRJNA1145574 | 12699 | 248 | 0.891429 | 2.21074392 | Campylobacter | 194 | Bacteria | Bacteria | 412 | 8.93e-111 | NTclustered | gi|2703256232|gb|CP148214.1| | 197 | g12515 | i0 | 99.558 | 91.1290322580645 | 226 | 1 | 91 | 0 | 23 | 248 | 391903 | 392128 | Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome | blastn | 22600 | 412 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 23985539 | 23985539 | PRJNA1145574_P_NODE_13979_length_245_cov_0.877907_g13795_i0 | PRJNA1145574 | 13979 | 245 | 0.877907 | 2.15087215 | Campylobacter | 194 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1859914723|gb|CP054848.1| | 197 | g13795 | i0 | 100 | 100.004081632653 | 245 | 0 | 100 | 0 | 1 | 245 | 795086 | 795330 | Campylobacter jejuni strain BfR-CA-12970 chromosome | blastn | 24501 | 453 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 23985585 | 23985585 | PRJNA1145574_P_NODE_7599_length_314_cov_1.058091_g7415_i0 | PRJNA1145574 | 7599 | 314 | 1.058091 | 3.32240574 | Campylobacter | 194 | Bacteria | Bacteria | 580 | 3.0299999999999992e-161 | NTclustered | gi|2252976028|dbj|AP025966.1| | 197 | g7415 | i0 | 100 | 100 | 314 | 0 | 100 | 0 | 1 | 314 | 67940 | 67627 | Campylobacter jejuni THJ022 DNA, complete genome | blastn | 31400 | 580 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 24514521 | 24514521 | PRJNA1145574_P_NODE_12940_length_248_cov_0.891429_g12756_i0 | PRJNA1145574 | 12940 | 248 | 0.891429 | 2.21074392 | Campylobacter coli | 195 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2844330661|gb|CP172384.1| | 195 | g12756 | i0 | 100 | 110 | 248 | 0 | 100 | 0 | 1 | 248 | 828029 | 828276 | Campylobacter coli strain YH512 chromosome, complete genome | blastn | 27280 | 459 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 30564660 | 30564660 | PRJNA1145574_P_NODE_14773_length_242_cov_0.923077_g14589_i0 | PRJNA1145574 | 14773 | 242 | 0.923077 | 2.23384634 | Helicobacter | 209 | Bacteria | Bacteria | 165 | 4.28e-47 | NR | WP_416831299.1 | 60246 | g14589 | i0 | 100 | 3.96694214876033 | 80 | 0 | 99.2 | 0 | 3 | 242 | 264 | 343 | WP_416831299.1 asparagine synthase (glutamine-hydrolyzing), partial [Helicobacter ganmani] | diamond | 960 | 165 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani | ||
| 30627970 | 30627970 | PRJNA1145574_P_NODE_13233_length_247_cov_0.896552_g13049_i0 | PRJNA1145574 | 13233 | 247 | 0.896552 | 2.21448344 | Helicobacter | 209 | Bacteria | Bacteria | 134 | 2.39e-34 | NR | WP_416824283.1 | 60246 | g13049 | i0 | 100 | 2.55060728744939 | 70 | 0 | 85 | 0 | 3 | 212 | 951 | 1020 | WP_416824283.1 transcription-repair coupling factor [Helicobacter ganmani] | diamond | 630 | 134 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;