RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA1145574" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1145574 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2308567 2308567 PRJNA1145574_P_NODE_10782_length_255_cov_1.593407_g10598_i0 PRJNA1145574 10782 255 1.593407 4.06318785 Ascomycota 4890 Fungi Fungi 472 1.5e-128   NTclustered gi|1134949146|gb|KX237674.1| 4909 g10598 i0 100 105 255 0 100 0 1 255 44 298 Pichia kudriavzevii isolate YNCA9005 large subunit ribosomal RNA gene, partial sequence blastn 26775 472 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kudriavzevii
2308584 2308584 PRJNA1145574_P_NODE_13362_length_246_cov_1.352601_g13178_i0 PRJNA1145574 13362 246 1.352601 3.32739846 Opisthokonta 33154 Fungi Fungi 449 6.74e-122   NTclustered gi|325484983|gb|HQ407432.1| 5061 g13178 i0 99.593 77.6422764227642 246 1 100 0 1 246 690 445 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 19100 449 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
6136125 6136125 PRJNA1145574_P_NODE_13545_length_246_cov_0.901734_g13361_i0 PRJNA1145574 13545 246 0.901734 2.21826564 Saccharomyces 4930 Fungi Fungi 449 6.74e-122   NTclustered gi|1389182097|gb|CP029160.1| 4932 g13361 i0 99.593 9.00406504065041 246 1 100 0 1 246 4182884 4183129 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 2215 449 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
6666632 6666632 PRJNA1145574_P_NODE_9606_length_276_cov_1.206897_g9422_i0 PRJNA1145574 9606 276 1.206897 3.33103572 Penicillium citrinum 5077 Fungi Fungi 355 1.73e-93   NTclustered gi|2513223681|ref|XM_056640085.1| 5077 g9422 i0 98.507 1.18840579710145 201 3 73 0 1 201 201 1 Penicillium citrinum uncharacterized protein (N7469_001165), partial mRNA blastn 328 355 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium citrinum
7941682 7941682 PRJNA1145574_P_NODE_12107_length_250_cov_0.881356_g11923_i0 PRJNA1145574 12107 250 0.881356 2.20339 Komagataella phaffii 460519 Fungi Fungi 455 1.48e-123   NTclustered gi|254566768|ref|XM_002490450.1| 644223 g11923 i0 100 0.984 246 0 98 0 1 246 246 1 Komagataella phaffii GS115 uncharacterized protein (PAS_chr1-4_0674), partial mRNA blastn 246 455 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Komagataella Komagataella phaffii
11236553 11236553 PRJNA1145574_P_NODE_13429_length_246_cov_0.901734_g13245_i0 PRJNA1145574 13429 246 0.901734 2.21826564 root 1 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|1389182097|gb|CP029160.1| 4932 g13245 i0 100 10 246 0 100 0 1 246 8118069 8117824 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 2460 455 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
11767302 11767302 PRJNA1145574_P_NODE_14550_length_243_cov_0.917647_g14366_i0 PRJNA1145574 14550 243 0.917647 2.22988221 Saccharomyces cerevisiae 4932 Fungi Fungi 449 6.65e-122   NTclustered gi|1389182097|gb|CP029160.1| 4932 g14366 i0 100 6.5843621399177 243 0 100 0 1 243 3300735 3300493 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 1600 449 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
11767303 11767303 PRJNA1145574_P_NODE_14610_length_243_cov_0.917647_g14426_i0 PRJNA1145574 14610 243 0.917647 2.22988221 Parastagonospora nodorum 13684 Fungi Fungi 316 7.03e-82   NTclustered gi|1759050537|gb|CP039675.1| 13684 g14426 i0 90.612 6.01234567901235 245 13 99 7 4 243 1292256 1292017 Parastagonospora nodorum strain Sn79 chromosome 6 blastn 1461 316 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Parastagonospora Parastagonospora nodorum
18140376 18140376 PRJNA1145574_P_NODE_14535_length_243_cov_0.917647_g14351_i0 PRJNA1145574 14535 243 0.917647 2.22988221 Teratosphaeriaceae sp. CCFEE 6253 2901253 Fungi Fungi 129 5.01e-34   NR KAK3116487.1 2901253 g14351 i0 86.1 1.96296296296296 79 11 97.5 0 238 2 267 345 KAK3116487.1 hypothetical protein LTR53_003091 [Teratosphaeriaceae sp. CCFEE 6253] diamond 477 129 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae   Teratosphaeriaceae sp. CCFEE 6253
19414706 19414706 PRJNA1145574_P_NODE_13196_length_247_cov_0.896552_g13012_i0 PRJNA1145574 13196 247 0.896552 2.21448344 Penicillium citrinum 5077 Fungi Fungi 451 1.88e-122   NTclustered gi|2513218659|ref|XM_056639239.1| 5077 g13012 i0 99.595 7.19838056680162 247 1 100 0 1 247 1575 1821 Penicillium citrinum Serine/threonine-protein kinase sid2 (N7469_000319), partial mRNA blastn 1778 451 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium citrinum
29470207 29470207 PRJNA1145574_P_NODE_12030_length_250_cov_0.881356_g11846_i0 PRJNA1145574 12030 250 0.881356 2.20339 Cladosporium halotolerans 1052096 Fungi Fungi 62.4 5.1e-9   NR XP_069229049.1 1052096 g11846 i0 73.2 0.492 41 11 49.2 0 127 249 1267 1307 XP_069229049.1 uncharacterized protein WHR41_04738 [Cladosporium halotolerans] diamond 123 62.4 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
30090894 30090894 PRJNA1145574_P_NODE_13912_length_245_cov_0.906977_g13728_i0 PRJNA1145574 13912 245 0.906977 2.22209365 Pleosporales 92860 Fungi Fungi 81.6 7.12e-16   NR KAH7083079.1 798071 g13728 i0 48.6 1.81224489795918 74 36 88.2 2 243 28 119 192 KAH7083079.1 heterokaryon incompatibility protein-domain-containing protein, partial [Paraphoma chrysanthemicola] diamond 444 81.6 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Paraphoma Paraphoma chrysanthemicola
32145920 32145920 PRJNA1145574_P_NODE_12838_length_248_cov_0.891429_g12654_i0 PRJNA1145574 12838 248 0.891429 2.21074392 Debaryomycetaceae 766764 Fungi Fungi 67.4 8.06e-11   NR XP_051619817.1 497108 g12654 i0 40 6.15725806451613 75 41 90.7 1 2 226 384 454 XP_051619817.1 DPL1 [Candida jiufengensis] diamond 1527 67.8 0.994100294985251 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida jiufengensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;