RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1145574", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1145574 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23985558 23985558 PRJNA1145574_P_NODE_4399_length_398_cov_0.923077_g4215_i0 PRJNA1145574 4399 398 0.923077 3.67384646 Girardia 52316 Platyhelminthes Platyhelminthes 736 0   NTclustered gi|2053535770|gb|MW972220.1| 6162 g4215 i0 100 26.6457286432161 398 0 100 0 1 398 14768 14371 Girardia tigrina voucher 2020-05-GT-P05 mitochondrion, complete genome blastn 10605 736 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Girardia Girardia tigrina
32840506 32840506 PRJNA1145574_P_NODE_6780_length_331_cov_1.189922_g6596_i0 PRJNA1145574 6780 331 1.189922 3.93864182 Opisthokonta 33154 Platyhelminthes Platyhelminthes 142 1.99e-40   NR KAA3677532.1 34504 g6596 i0 66.7 24.2447129909366 96 32 87 0 42 329 1 96 KAA3677532.1 Ras-related C3 botulinum toxin substrate 1 [Paragonimus westermani] diamond 8025 143 0.993006993006993 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;