RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1145276" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA1145276 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13042167 13042167 PRJNA1145276_P_NODE_4651_length_456_cov_2.211488_g4594_i0 PRJNA1145276 4651 456 2.211488 10.08438528 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 492 2.1999999999999992e-134   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g4594 i0 86.364 152.453947368421 462 50 99 10 2 456 3682515 3682060 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 69519 492 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
14317161 14317161 PRJNA1145276_P_NODE_11572_length_299_cov_1.345133_g11515_i0 PRJNA1145276 11572 299 1.345133 4.02194767 Egbenema sp. FJBBOT/2019 3398834 Bacteria Bacteria 486 6.429999999999999e-133   NTclustered gi|2917372002|gb|CP182236.1| 3398834 g11515 i0 96.013 151.428093645485 301 8 100 4 1 299 260520 260818 Egbenema sp. FJBBOT/2019 chromosome, complete genome blastn 45277 486 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oculatellales Oculatellaceae Egbenema Egbenema sp. FJBBOT/2019

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;