RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1144090" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1144090 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27797226 27797226 PRJNA1144090_P_NODE_51044_length_357_cov_1.626761_g50509_i0 PRJNA1144090 51044 357 1.626761 5.80753677 Minisyncoccota bacterium 2053589 Bacteria Bacteria 77 1.27e-13   NR HEY1041598.1 2053589 g50509 i0 43.7 0.865546218487395 103 55 86.6 1 2 310 122 221 HEY1041598.1 SulP family inorganic anion transporter [Candidatus Paceibacterota bacterium] diamond 309 77 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28302138 28302138 PRJNA1144090_P_NODE_114506_length_242_cov_0.911243_g113971_i0 PRJNA1144090 114506 242 0.911243 2.20520806 Minisyncoccota bacterium 2053589 Bacteria Bacteria 130 3.73e-33   NR MEZ0208791.1 2053589 g113971 i0 73.8 0.991735537190083 80 21 99.2 0 240 1 41 120 MEZ0208791.1 glucoamylase family protein [Candidatus Paceibacterota bacterium] diamond 240 130 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29175452 29175452 PRJNA1144090_P_NODE_49669_length_362_cov_2.173010_g49134_i0 PRJNA1144090 49669 362 2.17301 7.8662962 Bacteria 2 Bacteria Bacteria 48.1 7.17e-5   NR MFA5099123.1 2053589 g49134 i0 64.9 2.36187845303867 37 13 30.7 0 246 356 5 41 MFA5099123.1 50S ribosomal protein L34 [Candidatus Paceibacterota bacterium] diamond 855 48.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29964773 29964773 PRJNA1144090_P_NODE_50231_length_360_cov_2.038328_g49696_i0 PRJNA1144090 50231 360 2.038328 7.3379808 root 1 Root_unresolved Root_unresolved 65.1 9.82e-11   NR MFA6515138.1 2053589 g49696 i0 41.4 3.175 99 48 77.5 3 359 81 23 117 MFA6515138.1 methionine--tRNA ligase [Candidatus Paceibacterota bacterium] diamond 1143 65.5 0.993893129770992 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31271226 31271226 PRJNA1144090_P_NODE_41035_length_402_cov_2.808511_g40500_i0 PRJNA1144090 41035 402 2.808511 11.29021422 Minisyncoccota bacterium 2053589 Bacteria Bacteria 64.7 3.23e-9   NR MEZ0209065.1 2053589 g40500 i0 32.4 0.805970149253731 108 69 80.6 1 402 79 206 309 MEZ0209065.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 324 64.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31524396 31524396 PRJNA1144090_P_NODE_89196_length_266_cov_1.492228_g88661_i0 PRJNA1144090 89196 266 1.492228 3.96932648 Minisyncoccota bacterium 2053589 Bacteria Bacteria 61.6 1.14e-8   NR MEZ0208986.1 2053589 g88661 i0 36.6 0.924812030075188 82 52 92.5 0 264 19 649 730 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 246 61.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;