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contig_metadata

29 rows where bioproject = "PRJNA1144090", tax_phylum = "Methanobacteriota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 29 ✖

tax_phylum 1

  • Methanobacteriota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1144090 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
286907 286907 PRJNA1144090_P_NODE_116221_length_241_cov_0.916667_g115686_i0 PRJNA1144090 116221 241 0.916667 2.20916747 Archaeoglobus sulfaticallidus 1316941 Archaea Archaea 54.7 0.006   NTclustered gi|484591393|gb|CP005290.1| 387631 g115686 i0 96.97 0.136929460580913 33 0 13 1 142 173 218801 218833 Archaeoglobus sulfaticallidus PM70-1, complete genome blastn 33 54.7 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus Archaeoglobus sulfaticallidus
5390604 5390604 PRJNA1144090_P_NODE_51545_length_355_cov_2.021277_g51010_i0 PRJNA1144090 51545 355 2.021277 7.17553335 Methanosarcina barkeri 2208 Archaea Archaea 54.7 0.009   NTclustered gi|827396966|gb|CP008746.1| 796385 g51010 i0 100 0.0816901408450704 29 0 8 0 86 114 3731152 3731180 Methanosarcina barkeri CM1, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
6665558 6665558 PRJNA1144090_P_NODE_74266_length_293_cov_1.936364_g73731_i0 PRJNA1144090 74266 293 1.936364 5.67354652 Halorientalis marina 2931976 Archaea Archaea 54.7 0.008   NTclustered gi|2225350885|gb|CP095487.1| 2931976 g73731 i0 96.875 0.109215017064846 32 1 11 0 154 185 660418 660449 Halorientalis marina strain GDY88 chromosome, complete genome blastn 32 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorientalis Halorientalis marina
7939975 7939975 PRJNA1144090_P_NODE_111567_length_244_cov_0.900585_g111032_i0 PRJNA1144090 111567 244 0.900585 2.1974274 Natribaculum breve 1419050 Archaea Archaea 52.8 0.022   NTclustered gi|2224381021|gb|CP095390.1| 1419050 g111032 i0 100 0.114754098360656 28 0 11 0 18 45 2199606 2199579 Natribaculum breve strain TRM20010 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natribaculum Natribaculum breve
11765819 11765819 PRJNA1144090_P_NODE_28330_length_497_cov_1.275943_g27796_i0 PRJNA1144090 28330 497 1.275943 6.34143671 Methanosphaera stadtmanae 2317 Archaea Archaea 54.7 0.013   NTclustered gi|1721134173|emb|LR698975.1| 2317 g27796 i0 100 0.0583501006036217 29 0 6 0 401 429 1447215 1447243 Methanosphaera stadtmanae isolate MGYG-HGUT-02164 genome assembly, chromosome: 1 blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera stadtmanae
21963656 21963656 PRJNA1144090_P_NODE_109238_length_245_cov_0.895349_g108703_i0 PRJNA1144090 109238 245 0.895349 2.19360505 Natrononativus amylolyticus 2963434 Archaea Archaea 52.8 0.022   NTclustered gi|2274417431|gb|CP101458.1| 2963434 g108703 i0 100 0.114285714285714 28 0 11 0 44 71 2451136 2451163 Natrononativus amylolyticus strain CGA73 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrononativus Natrononativus amylolyticus
26595459 26595459 PRJNA1144090_P_NODE_96821_length_254_cov_1.701657_g96286_i0 PRJNA1144090 96821 254 1.701657 4.32220878 Methanoculleus sp. 90427 Archaea Archaea 84.3 9.77e-17   NR HQC33726.1 90427 g96286 i0 52 2.65748031496063 75 36 88.6 0 233 9 471 545 HQC33726.1 AAA domain-containing protein [Methanoculleus sp.] diamond 675 84.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
26806273 26806273 PRJNA1144090_P_NODE_73861_length_294_cov_1.393665_g73326_i0 PRJNA1144090 73861 294 1.393665 4.0973751 root 1 Root_unresolved Root_unresolved 122 3.22e-30   NR MCJ7445913.1 2595067 g73326 i0 65.3 2 98 34 100 0 1 294 324 421 MCJ7445913.1 SPFH domain-containing protein [Methanotrichaceae archaeon] diamond 588 122 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
27153844 27153844 PRJNA1144090_P_NODE_53082_length_349_cov_3.550725_g52547_i0 PRJNA1144090 53082 349 3.550725 12.39203025 root 1 Root_unresolved Root_unresolved 100 4.81e-24   NR WP_008386712.1 411361 g52547 i0 50.5 5.03724928366762 97 43 79.9 2 70 348 2 97 WP_008386712.1 SRPBCC domain-containing protein [Halogeometricum pallidum] diamond 1758 100 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum pallidum
27196752 27196752 PRJNA1144090_P_NODE_57462_length_335_cov_1.759542_g56927_i0 PRJNA1144090 57462 335 1.759542 5.8944657 Halalkalicoccus tibetensis 175632 Archaea Archaea 69.3 8.91e-12   NR WP_340605468.1 175632 g56927 i0 37.6 0.832835820895522 93 54 82.4 3 334 59 106 195 WP_340605468.1 isoprenylcysteine carboxylmethyltransferase family protein [Halalkalicoccus tibetensis] diamond 279 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
27196758 27196758 PRJNA1144090_P_NODE_59402_length_329_cov_2.742188_g58867_i0 PRJNA1144090 59402 329 2.742188 9.02179852 Methanobacteriota archaeon 2026739 Archaea Archaea 72.8 7.58e-13   NR MAR41743.1 2026739 g58867 i0 78 4.09422492401216 41 9 37.4 0 221 99 11 51 MAR41743.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 1347 72.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27407340 27407340 PRJNA1144090_P_NODE_43203_length_391_cov_1.783019_g42668_i0 PRJNA1144090 43203 391 1.783019 6.97160429 root 1 Root_unresolved Root_unresolved 70.5 4.02e-11   NR RZD50427.1 2026739 g42668 i0 35.8 3.0383631713555 109 64 83.6 2 354 28 810 912 RZD50427.1 MAG: hypothetical protein CXT67_09420, partial [Methanobacteriota archaeon] diamond 1188 70.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28018113 28018113 PRJNA1144090_P_NODE_100105_length_250_cov_4.146893_g99570_i0 PRJNA1144090 100105 250 4.146893 10.3672325 Methanospirillum sp. J.3.6.1-F.2.7.3 2834276 Archaea Archaea 58.9 7.71e-8   NR WP_250545260.1 2834276 g99570 i0 43.2 2.76 74 36 88.8 1 27 248 331 398 WP_250545260.1 ATP-binding protein [Methanospirillum purgamenti] diamond 690 58.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum purgamenti
28175765 28175765 PRJNA1144090_P_NODE_7766_length_1021_cov_3.946203_g7401_i0 PRJNA1144090 7766 1021 3.946203 40.29073263 Methanobacteriota archaeon 2026739 Archaea Archaea 281 1.97e-89   NR NOZ59230.1 2026739 g7401 i0 46.3 2.85896180215475 322 165 93.1 4 70 1020 21 339 NOZ59230.1 bis-aminopropyl spermidine synthase family protein [Methanobacteriota archaeon] diamond 2919 281 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28238801 28238801 PRJNA1144090_P_NODE_108446_length_245_cov_2.284884_g107911_i0 PRJNA1144090 108446 245 2.284884 5.5979658 Methanotrichaceae archaeon 2595067 Archaea Archaea 84.7 5.77e-17   NR MCJ7445913.1 2595067 g107911 i0 59.3 1.98367346938776 81 33 99.2 0 245 3 241 321 MCJ7445913.1 SPFH domain-containing protein [Methanotrichaceae archaeon] diamond 486 84.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
28460254 28460254 PRJNA1144090_P_NODE_20286_length_603_cov_1.428302_g19762_i0 PRJNA1144090 20286 603 1.428302 8.61266106 Methanolobus zinderi 536044 Archaea Archaea 63.5 7.76e-8   NR WP_176965193.1 536044 g19762 i0 29.6 0.671641791044776 135 82 64.7 4 496 107 485 611 WP_176965193.1 PKD domain-containing protein [Methanolobus zinderi] diamond 405 63.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus zinderi
28965477 28965477 PRJNA1144090_P_NODE_95468_length_256_cov_1.901639_g94933_i0 PRJNA1144090 95468 256 1.901639 4.86819584 Candidatus Nanohaloarchaea archaeon 2594798 Archaea Archaea 69.3 1.24e-11   NR MFO7794222.1 2594798 g94933 i0 50.7 1.79296875 67 31 78.5 1 202 2 11 75 MFO7794222.1 oxidoreductase [Candidatus Nanohaloarchaea archaeon] diamond 459 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Nanohaloarchaea       Candidatus Nanohaloarchaea archaeon
29186551 29186551 PRJNA1144090_P_NODE_9469_length_919_cov_5.776596_g9047_i0 PRJNA1144090 9469 919 5.776596 53.08691724 Methanobacteriota archaeon 2026739 Archaea Archaea 69.7 3.38e-9   NR RMG33649.1 2026739 g9047 i0 26.4 0.705114254624592 216 141 68.2 6 686 60 180 384 RMG33649.1 MAG: hypothetical protein D6732_11770 [Methanobacteriota archaeon] diamond 648 69.7 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29553952 29553952 PRJNA1144090_P_NODE_24350_length_543_cov_2.093617_g23820_i0 PRJNA1144090 24350 543 2.093617 11.36834031 Methanobacteriati 3366610 Archaea Archaea 241 5.79e-77   NR MBH33411.1 2026739 g23820 i0 70.2 25.5193370165746 171 50 93.9 1 512 3 57 227 MBH33411.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 13857 241 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29754486 29754486 PRJNA1144090_P_NODE_6151_length_1155_cov_4.006470_g5825_i0 PRJNA1144090 6151 1155 4.00647 46.2747285 Methanobacteriota archaeon 2026739 Archaea Archaea 54.7 3.78e-4   NR MBW3584087.1 2026739 g5825 i0 27.8 0.420779220779221 162 99 40 7 1135 674 217 368 MBW3584087.1 protein kinase [Methanobacteriota archaeon] diamond 486 54.7 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29881084 29881084 PRJNA1144090_P_NODE_12631_length_789_cov_3.092179_g12173_i0 PRJNA1144090 12631 789 3.092179 24.39729231 Methanoregula sp. 2052170 Archaea Archaea 78.6 1.47e-13   NR HUH79601.1 2052170 g12173 i0 30 0.722433460076046 190 121 71.9 5 161 727 13 191 HUH79601.1 class I SAM-dependent methyltransferase [Methanoregula sp.] diamond 570 78.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
30122525 30122525 PRJNA1144090_P_NODE_10612_length_865_cov_1.845960_g10179_i0 PRJNA1144090 10612 865 1.84596 15.967554 Methanospirillum 2202 Archaea Archaea 199 6.639999999999999e-56   NR WP_109940921.1 1277351 g10179 i0 45.2 5.28554913294798 250 131 86.4 4 757 11 2 246 WP_109940921.1 AAA-like domain-containing protein [Methanospirillum stamsii] diamond 4572 200 0.995 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum stamsii
30733959 30733959 PRJNA1144090_P_NODE_49254_length_364_cov_1.357388_g48719_i0 PRJNA1144090 49254 364 1.357388 4.94089232 Haloarculaceae archaeon 2497615 Archaea Archaea 74.7 8.71e-13   NR MFB6169688.1 2497615 g48719 i0 44.6 1.34340659340659 83 45 67.6 1 362 117 100 182 MFB6169688.1 metallophosphoesterase [Haloarculaceae archaeon] diamond 489 74.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae   Haloarculaceae archaeon
30892134 30892134 PRJNA1144090_P_NODE_44934_length_382_cov_5.190939_g44399_i0 PRJNA1144090 44934 382 5.190939 19.82938698 Methanobacteriota archaeon 2026739 Archaea Archaea 172 1.95e-51   NR MAR41743.1 2026739 g44399 i0 73 3.54973821989529 111 30 87.2 0 333 1 11 121 MAR41743.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 1356 172 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31271275 31271275 PRJNA1144090_P_NODE_87795_length_268_cov_1.928205_g87260_i0 PRJNA1144090 87795 268 1.928205 5.1675894 Candidatus Nanohaloarchaea archaeon 2594798 Archaea Archaea 57.4 1.94e-8   NR MFO7793742.1 2594798 g87260 i0 49.1 0.593283582089552 53 26 58.2 1 168 13 32 84 MFO7793742.1 hypothetical protein [Candidatus Nanohaloarchaea archaeon] diamond 159 57.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Nanohaloarchaea       Candidatus Nanohaloarchaea archaeon
31492723 31492723 PRJNA1144090_P_NODE_115596_length_241_cov_1.684524_g115061_i0 PRJNA1144090 115596 241 1.684524 4.05970284 Methanosarcinales archaeon 2250255 Archaea Archaea 46.6 4.56e-4   NR MFQ6120741.1 2250255 g115061 i0 70.4 0.336099585062241 27 8 33.6 0 115 195 2 28 MFQ6120741.1 zinc-ribbon domain-containing protein [Methanosarcinales archaeon] diamond 81 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31544942 31544942 PRJNA1144090_P_NODE_70976_length_300_cov_1.938326_g70441_i0 PRJNA1144090 70976 300 1.938326 5.814978 Methanobacteriati 3366610 Archaea Archaea 92.8 1.54e-19   NR RMF90095.1 2026739 g70441 i0 46.5 2.97 99 53 99 0 3 299 298 396 RMF90095.1 MAG: pyruvate kinase [Methanobacteriota archaeon] diamond 891 92.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32220290 32220290 PRJNA1144090_P_NODE_81498_length_279_cov_1.495146_g80963_i0 PRJNA1144090 81498 279 1.495146 4.17145734 Methanococcoides sp. AM1 1201011 Archaea Archaea 43.1 0.0342   NR WP_135611661.1 1201011 g80963 i0 35.1 0.612903225806452 57 37 61.3 0 51 221 5 61 WP_135611661.1 hypothetical protein [Methanococcoides sp. AM1] diamond 171 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides Methanococcoides sp. AM1
32505199 32505199 PRJNA1144090_P_NODE_89119_length_266_cov_1.595855_g88584_i0 PRJNA1144090 89119 266 1.595855 4.2449743 Methanobacteriota archaeon 2026739 Archaea Archaea 88.2 7.74e-20   NR MAT49394.1 2026739 g88584 i0 48.2 1.93984962406015 85 44 95.9 0 8 262 24 108 MAT49394.1 hypothetical protein [Methanobacteriota archaeon] diamond 516 88.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;