RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA1144090", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 13 ✖

tax_phylum 1

  • Lenarviricota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1144090 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
286781 286781 PRJNA1144090_P_NODE_100761_length_250_cov_0.870056_g100226_i0 PRJNA1144090 100761 250 0.870056 2.17514 Mitoviridae sp. 2809572 Viruses Viruses 52.8 0.023   NTclustered gi|2245489900|gb|ON164060.1| 2809572 g100226 i0 100 0.112 28 0 11 0 165 192 792 765 MAG: Mitoviridae sp. isolate s59-k141_998920 RNA dependent RNA polymerase gene, partial cds blastn 28 52.8 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.
24513143 24513143 PRJNA1144090_P_NODE_360_length_3167_cov_23.190692_g317_i0 PRJNA1144090 360 3167 23.190692 734.44921564 Narnavirus sp. 2587225 Viruses Viruses 1073 0   NR CAK7594499.1 2587225 g317 i0 53.5 1.87180296810862 993 447 93.2 9 3046 95 1 987 CAK7594499.1 RNA-dependent RNA polymerase [Narnavirus sp.] diamond 5928 1073 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
27102065 27102065 PRJNA1144090_P_NODE_98182_length_252_cov_1.720670_g97647_i0 PRJNA1144090 98182 252 1.72067 4.3360884 Dracophyllum associated narna-like virus 55 3066892 Viruses Viruses 78.2 7.12e-15   NR WPR17259.1 3066892 g97647 i0 46.4 1 84 45 100 0 1 252 4 87 WPR17259.1 MAG: RNA-dependent RNA polymerase, partial [Dracophyllum associated narna-like virus 55] diamond 252 78.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Dracophyllum associated narna-like virus 55
27196691 27196691 PRJNA1144090_P_NODE_1022_length_2310_cov_12.686187_g931_i0 PRJNA1144090 1022 2310 12.686187 293.0509197 Downy mildew lesion associated splipalmivirus 4 2719525 Viruses Viruses 388 3.87e-120   NR WNA22212.1 2719525 g931 i0 39.2 1.52077922077922 571 333 73.2 7 2020 329 70 633 WNA22212.1 MAG: RdRp [Downy mildew lesion associated splipalmivirus 4] diamond 3513 388 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Jakapalmivirus Jakapalmivirus italiense
27481291 27481291 PRJNA1144090_P_NODE_45783_length_378_cov_3.006557_g45248_i0 PRJNA1144090 45783 378 3.006557 11.36478546 Downy mildew lesion associated splipalmivirus 46 3065434 Viruses Viruses 61.2 5.54e-8   NR WLJ60693.1 3065434 g45248 i0 32 0.793650793650794 100 66 79.4 2 316 17 191 288 WLJ60693.1 MAG: putative RdRp [Downy mildew lesion associated splipalmivirus 46] diamond 300 61.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 46
28606901 28606901 PRJNA1144090_P_NODE_807_length_2506_cov_20.563913_g726_i0 PRJNA1144090 807 2506 20.563913 515.33165978 Narnavirus 186767 Viruses Viruses 464 3.03e-147   NR QJT93782.1 2736407 g726 i0 38.5 3.59377494014366 753 428 87.3 12 210 2396 44 785 QJT93782.1 RNA-dependent RNA polymerase [Erysiphe necator associated narnavirus 50] diamond 9006 465 0.997849462365591 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Erysiphe necator associated narnavirus 50
28670175 28670175 PRJNA1144090_P_NODE_25567_length_527_cov_3.491189_g25035_i0 PRJNA1144090 25567 527 3.491189 18.39856603 Narnavirus 186767 Viruses Viruses 58.5 1.98e-6   NR WNA22215.1 2719531 g25035 i0 26.8 2.63567362428843 149 107 83.7 2 501 61 292 440 WNA22215.1 MAG: RdRp [Downy mildew lesion associated splipalmivirus 6] diamond 1389 58.9 0.99320882852292 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 6
29912760 29912760 PRJNA1144090_P_NODE_991_length_2330_cov_4.832964_g901_i0 PRJNA1144090 991 2330 4.832964 112.6080612 Penaeus vannamei narna-like virus 2 3132560 Viruses Viruses 554 5.699999999999997e-184   NR WWZ85650.1 3132560 g901 i0 45.3 0.849785407725322 660 343 83.9 11 41 1996 2 651 WWZ85650.1 hypothetical protein [Penaeus vannamei narna-like virus 2] diamond 1980 554 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Penaeus vannamei narna-like virus 2
30292078 30292078 PRJNA1144090_P_NODE_4852_length_1289_cov_10.805921_g4573_i0 PRJNA1144090 4852 1289 10.805921 139.28832169 Downy mildew lesion associated splipalmivirus 1 2719492 Viruses Viruses 68.9 3.41e-9   NR WNA22205.1 2719492 g4573 i0 30.9 0.474786656322731 204 116 45.2 7 1127 546 42 230 WNA22205.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 1] diamond 612 68.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 1
31039216 31039216 PRJNA1144090_P_NODE_6635_length_1108_cov_24.632850_g6299_i0 PRJNA1144090 6635 1108 24.63285 272.931978 Wolframvirales 2732502 Viruses Viruses 69.3 1.7e-9   NR WNA22207.1 2719503 g6299 i0 25.7 1.23736462093863 249 153 67.1 6 211 954 11 228 WNA22207.1 MAG: hypothetical protein, partial [Downy mildew lesion associated splipalmivirus 2] diamond 1371 69.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 2
31176060 31176060 PRJNA1144090_P_NODE_5675_length_1203_cov_164.884071_g5365_i0 PRJNA1144090 5675 1203 164.884071 1983.55537413 Narnavirus sp. 2587225 Viruses Viruses 65.1 1.52e-8   NR CAK8705411.1 2587225 g5365 i0 34.4 1.14214463840399 128 73 31.4 3 1106 729 4 122 CAK8705411.1 uncharacterized [Narnavirus sp.] diamond 1374 65.1 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.
31461153 31461153 PRJNA1144090_P_NODE_119056_length_232_cov_2.754717_g118521_i0 PRJNA1144090 119056 232 2.754717 6.39094344 Praha narna-like virus 4 2789507 Viruses Viruses 82.4 3.37e-16   NR QPN36961.1 2789507 g118521 i0 59.5 0.956896551724138 74 27 95.7 1 230 9 526 596 QPN36961.1 hypothetical protein [Praha narna-like virus 4] diamond 222 82.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Praha narna-like virus 4
31639582 31639582 PRJNA1144090_P_NODE_18576_length_633_cov_5.464286_g18053_i0 PRJNA1144090 18576 633 5.464286 34.58893038 Narnavirus 186767 Viruses Viruses 85.5 2.52e-15   NR WNA22223.1 3070777 g18053 i0 31.5 1.52132701421801 162 108 76.3 3 604 122 117 276 WNA22223.1 MAG: RdRp [Downy mildew lesion associated splipalmivirus 45] diamond 963 85.5 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 45

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;