RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1144090", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1144090 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29533659 29533659 PRJNA1144090_P_NODE_94930_length_257_cov_1.673913_g94395_i0 PRJNA1144090 94930 257 1.673913 4.30195641 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 50.1 1.15e-4   NR MEM3858771.1 2953041 g94395 i0 33.8 0.933852140077821 80 47 93.4 1 253 14 91 164 MEM3858771.1 ankyrin repeat domain-containing protein [Candidatus Micrarchaeaceae archaeon] diamond 240 50.1 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon
30038875 30038875 PRJNA1144090_P_NODE_50991_length_357_cov_2.028169_g50456_i0 PRJNA1144090 50991 357 2.028169 7.24056333 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 70.1 6.04e-13   NR MFH1521044.1 2250274 g50456 i0 41.2 0.714285714285714 85 48 70.6 2 4 255 2 85 MFH1521044.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 255 70.1 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
30249266 30249266 PRJNA1144090_P_NODE_111652_length_243_cov_5.929412_g111117_i0 PRJNA1144090 111652 243 5.929412 14.40847116 Archaea 2157 Archaea Archaea 84 6.26e-17   NR PIO02069.1 1974416 g111117 i0 52.2 7.51851851851852 67 32 82.7 0 201 1 5 71 PIO02069.1 MAG: polyprenyl synthetase [Candidatus Micrarchaeota archaeon CG09_land_8_20_14_0_10_60_16] diamond 1827 84 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon CG09_land_8_20_14_0_10_60_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;