RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJNA1144090", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 16 ✖

tax_clade 1

  • Sar · 16 ✖

bioproject 1

  • PRJNA1144090 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5390856 5390856 PRJNA1144090_P_NODE_75345_length_291_cov_1.412844_g74810_i0 PRJNA1144090 75345 291 1.412844 4.11137604 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|294925773|ref|XM_002778955.1| 423536 g74810 i0 96.875 0.109965635738832 32 0 11 1 21 51 475 444 Perkinsus marinus ATCC 50983 heat shock 40 kDa protein, putative, mRNA blastn 32 52.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
7940482 7940482 PRJNA1144090_P_NODE_51767_length_354_cov_2.459075_g51232_i0 PRJNA1144090 51767 354 2.459075 8.7051255 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 143 1.14e-39   NR KAF4704039.1 32597 g51232 i0 57.9 7.73728813559322 114 48 96.6 0 347 6 41 154 KAF4704039.1 Spliceosome RNA helicase ddx39b, partial [Perkinsus olseni] diamond 2739 144 0.993055555555556 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
15590293 15590293 PRJNA1144090_P_NODE_51773_length_354_cov_2.377224_g51238_i0 PRJNA1144090 51773 354 2.377224 8.41537296 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 103 1.03e-24   NR KAF4662940.1 32597 g51238 i0 65.8 18.2203389830508 76 26 64.4 0 125 352 135 210 KAF4662940.1 hypothetical protein FOZ61_002076 [Perkinsus olseni] diamond 6450 103 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
21963664 21963664 PRJNA1144090_P_NODE_11038_length_847_cov_168.697674_g10601_i0 PRJNA1144090 11038 847 168.697674 1428.86929878 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 106 6.45e-18   NTclustered gi|294874782|ref|XM_002767050.1| 423536 g10601 i0 93.056 0.12987012987013 72 5 9 0 613 684 79 8 Perkinsus marinus ATCC 50983 60S ribosomal protein L29, putative, mRNA blastn 110 106 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
26995936 26995936 PRJNA1144090_P_NODE_68782_length_305_cov_1.974138_g68247_i0 PRJNA1144090 68782 305 1.974138 6.0211209 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.91e-4   NR KAF4723410.1 32597 g68247 i0 46.5 3.41311475409836 43 23 42.3 0 305 177 72 114 KAF4723410.1 Programmed cell death protein 2 [Perkinsus olseni] diamond 1041 50.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27196759 27196759 PRJNA1144090_P_NODE_602_length_2732_cov_11.925160_g541_i0 PRJNA1144090 602 2732 11.92516 325.7953712 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 86.7 1.89e-14   NR KAF4662880.1 330153 g541 i0 29.7 0.251464128843338 229 138 23.8 6 1995 2645 61 278 KAF4662880.1 hypothetical protein FOL47_006022 [Perkinsus chesapeaki] diamond 687 86.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
27576077 27576077 PRJNA1144090_P_NODE_93824_length_259_cov_1.048387_g93289_i0 PRJNA1144090 93824 259 1.048387 2.71532233 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0102   NR KAF4751769.1 32597 g93289 i0 44.7 1.63320463320463 47 26 54.4 0 119 259 56 102 KAF4751769.1 hypothetical protein FOZ63_017597, partial [Perkinsus olseni] diamond 423 44.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27628337 27628337 PRJNA1144090_P_NODE_48264_length_367_cov_5.568027_g47729_i0 PRJNA1144090 48264 367 5.568027 20.43465909 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 120 1.22e-28   NR KAF4668336.1 32597 g47729 i0 54.6 6.88283378746594 119 29 97.3 1 366 10 870 963 KAF4668336.1 DNA-directed RNA polymerase III subunit RPC2 [Perkinsus olseni] diamond 2526 120 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
27702650 27702650 PRJNA1144090_P_NODE_6284_length_1141_cov_4.784644_g5957_i0 PRJNA1144090 6284 1141 4.784644 54.59278804 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 48.9 0.0289   NR KAF4739503.1 32597 g5957 i0 23.5 0.615249780893953 234 168 61 7 409 1104 178 402 KAF4739503.1 hypothetical protein FOZ63_031216, partial [Perkinsus olseni] diamond 702 48.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28133471 28133471 PRJNA1144090_P_NODE_65625_length_313_cov_1.095833_g65090_i0 PRJNA1144090 65625 313 1.095833 3.42995729 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 47.8 6.89e-4   NR KAF4663001.1 32597 g65090 i0 40.7 4.99361022364217 59 34 56.5 1 188 12 25 82 KAF4663001.1 hypothetical protein FOZ61_002009 [Perkinsus olseni] diamond 1563 47.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28618072 28618072 PRJNA1144090_P_NODE_120627_length_226_cov_2.196078_g120092_i0 PRJNA1144090 120627 226 2.196078 4.96313628 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 61.6 5.38e-9   NR KAF4697565.1 32597 g120092 i0 63.9 1.63274336283186 36 13 47.8 0 216 109 40 75 KAF4697565.1 hypothetical protein FOZ60_004437 [Perkinsus olseni] diamond 369 61.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
29017751 29017751 PRJNA1144090_P_NODE_68648_length_305_cov_2.711207_g68113_i0 PRJNA1144090 68648 305 2.711207 8.26918135 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 67 8.93e-11   NR KAF4754408.1 32597 g68113 i0 41.7 5.0655737704918 103 56 98.4 3 302 3 76 177 KAF4754408.1 nucleolar gtp-binding protein, partial [Perkinsus olseni] diamond 1545 67 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30133337 30133337 PRJNA1144090_P_NODE_52152_length_353_cov_1.514286_g51617_i0 PRJNA1144090 52152 353 1.514286 5.34542958 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 140 8.68e-39   NR KAF4661518.1 32597 g51617 i0 53 6.01699716713881 117 54 99.4 1 1 351 59 174 KAF4661518.1 GDP-L-fucose synthase, partial [Perkinsus olseni] diamond 2124 140 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30481333 30481333 PRJNA1144090_P_NODE_97053_length_254_cov_1.469613_g96518_i0 PRJNA1144090 97053 254 1.469613 3.73281702 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 55.5 4.04e-7   NR XP_002784736.1 423536 g96518 i0 36.8 5.38582677165354 57 36 67.3 0 196 26 10 66 XP_002784736.1 multidrug resistance pump, putative [Perkinsus marinus ATCC 50983] diamond 1368 55.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
32430701 32430701 PRJNA1144090_P_NODE_107119_length_246_cov_1.526012_g106584_i0 PRJNA1144090 107119 246 1.526012 3.75398952 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 73.2 7.45e-13   NR KAF4667294.1 32597 g106584 i0 51.2 10.7439024390244 82 39 98.8 1 244 2 1609 1690 KAF4667294.1 hypothetical protein FOZ61_008445 [Perkinsus olseni] diamond 2643 73.6 0.994565217391304 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32568473 32568473 PRJNA1144090_P_NODE_27799_length_502_cov_2.132867_g27265_i0 PRJNA1144090 27799 502 2.132867 10.70699234 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 122 8.61e-29   NR KAF4651656.1 32597 g27265 i0 53.7 0.723107569721116 121 52 69.9 1 63 413 76 196 KAF4651656.1 hypothetical protein FOZ61_010304 [Perkinsus olseni] diamond 363 122 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;