RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1144090", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1144090 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29269795 29269795 PRJNA1144090_P_NODE_68769_length_305_cov_1.982759_g68234_i0 PRJNA1144090 68769 305 1.982759 6.04741495 Pseudomonadati 3379134 Bacteria Bacteria 116 5.119999999999999e-28   NR MCE9613984.1 1932692 g68234 i0 56.9 17.9311475409836 102 43 99.3 1 305 3 283 384 MCE9613984.1 carbohydrate kinase [Lentisphaerota bacterium] diamond 5469 117 0.991452991452991 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
29533590 29533590 PRJNA1144090_P_NODE_33510_length_451_cov_1.928571_g32975_i0 PRJNA1144090 33510 451 1.928571 8.69785521 Lentisphaerota bacterium 1932692 Bacteria Bacteria 117 2.18e-27   NR NQT93403.1 1932692 g32975 i0 47.7 2.50110864745011 128 63 85.1 1 450 67 269 392 NQT93403.1 hypothetical protein [Lentisphaerota bacterium] diamond 1128 117 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;