RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1144090", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1144090 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26943773 26943773 PRJNA1144090_P_NODE_106722_length_246_cov_2.606936_g106187_i0 PRJNA1144090 106722 246 2.606936 6.41306256 Kiritimatiellota bacterium 2599938 Bacteria Bacteria 76.6 2e-14   NR MDP2991083.1 2599938 g106187 i0 43.4 3.8780487804878 83 46 100 1 1 246 3 85 MDP2991083.1 D-hexose-6-phosphate mutarotase [Kiritimatiellota bacterium] diamond 954 76.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium
31070694 31070694 PRJNA1144090_P_NODE_89375_length_265_cov_3.197917_g88840_i0 PRJNA1144090 89375 265 3.197917 8.47448005 root 1 Root_unresolved Root_unresolved 70.9 4.52e-12   NR MAW40001.1 2026752 g88840 i0 42 4.92452830188679 88 51 99.6 0 265 2 4 91 MAW40001.1 anthranilate phosphoribosyltransferase [Kiritimatiellaceae bacterium] diamond 1305 71.6 0.990223463687151 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae   Kiritimatiellaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;