RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1144090", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 10 ✖

tax_clade 1

  • Metamonada · 10 ✖

bioproject 1

  • PRJNA1144090 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24513031 24513031 PRJNA1144090_P_NODE_25720_length_525_cov_4.139381_g25187_i0 PRJNA1144090 25720 525 4.139381 21.73175025 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 218 3.14e-69   NR KAG9392310.1 201153 g25187 i0 64.2 4.61714285714286 162 58 92.6 0 1 486 1 162 KAG9392310.1 calcineurin regulatory subunit B [Carpediemonas membranifera] diamond 2424 218 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
27217240 27217240 PRJNA1144090_P_NODE_80042_length_282_cov_1.105263_g79507_i0 PRJNA1144090 80042 282 1.105263 3.11684166 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.3 8.38e-8   NR GIQ85269.1 797122 g79507 i0 41.7 1.19148936170213 60 35 63.8 0 281 102 167 226 GIQ85269.1 hypothetical protein KIPB_006908, partial [Kipferlia bialata] diamond 336 59.7 0.993299832495812 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
27544504 27544504 PRJNA1144090_P_NODE_71104_length_300_cov_1.356828_g70569_i0 PRJNA1144090 71104 300 1.356828 4.070484 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 55.1 2.93e-6   NR GKT32654.1 2918883 g70569 i0 43.5 1.52 62 32 59 1 242 66 104 165 GKT32654.1 E3 ubiquitin-protein ligase Rad18 like protein [Aduncisulcus paluster] diamond 456 55.1 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
29975669 29975669 PRJNA1144090_P_NODE_11931_length_813_cov_4.087838_g11478_i0 PRJNA1144090 11931 813 4.087838 33.23412294 Hexamita inflata 28002 Fornicata other_Eukaryota 104 4.64e-21   NR CAK8776523.1 28002 g11478 i0 29 2.11070110701107 286 172 97.4 9 794 3 609 885 CAK8776523.1 HINF_030324 [Hexamita inflata] diamond 1716 104 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
30355313 30355313 PRJNA1144090_P_NODE_101532_length_250_cov_0.870056_g100997_i0 PRJNA1144090 101532 250 0.870056 2.17514 Kipferlia bialata 797122 Fornicata other_Eukaryota 119 1.08e-29   NR GIQ81592.1 797122 g100997 i0 60.9 1.044 87 28 97.2 1 249 7 326 412 GIQ81592.1 hypothetical protein KIPB_002573 [Kipferlia bialata] diamond 261 119 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
30575801 30575801 PRJNA1144090_P_NODE_77193_length_287_cov_1.514019_g76658_i0 PRJNA1144090 77193 287 1.514019 4.34523453 Kipferlia bialata 797122 Fornicata other_Eukaryota 72 1.1e-12   NR GIQ79376.1 797122 g76658 i0 50.5 0.951219512195122 91 44 95.1 1 273 1 16 105 GIQ79376.1 ribosomal protein L7, eukaryotic [Kipferlia bialata] diamond 273 72 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
30702409 30702409 PRJNA1144090_P_NODE_77234_length_287_cov_1.439252_g76699_i0 PRJNA1144090 77234 287 1.439252 4.13065324 Kipferlia bialata 797122 Fornicata other_Eukaryota 62 1.07e-8   NR GIQ83092.1 797122 g76699 i0 40.9 2.35191637630662 66 36 69 1 257 60 158 220 GIQ83092.1 hypothetical protein KIPB_004348 [Kipferlia bialata] diamond 675 62 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
31966884 31966884 PRJNA1144090_P_NODE_108438_length_245_cov_2.331395_g107903_i0 PRJNA1144090 108438 245 2.331395 5.71191775 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 49.7 1.36e-4   NR GKT35657.1 2918883 g107903 i0 37.7 0.844897959183673 69 39 82 2 21 221 520 586 GKT35657.1 Ras-like guanine nucleotide exchange factor like protein [Aduncisulcus paluster] diamond 207 49.7 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
32757185 32757185 PRJNA1144090_P_NODE_60400_length_326_cov_8.727273_g59865_i0 PRJNA1144090 60400 326 8.727273 28.45090998 Kipferlia bialata 797122 Fornicata other_Eukaryota 128 7.420000000000001e-36   NR GCA62516.1 797122 g59865 i0 62 0.993865030674847 108 34 96.6 2 324 10 2 105 GCA62516.1 peptidyl-prolyl cis-trans isomerase, FKBP-type [Kipferlia bialata] diamond 324 128 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
32820092 32820092 PRJNA1144090_P_NODE_104580_length_248_cov_0.880000_g104045_i0 PRJNA1144090 104580 248 0.88 2.1824 Giardia intestinalis 5741 Fornicata other_Eukaryota 56.2 6.95e-7   NR XP_001709467.2 5741 g104045 i0 41.1 0.883064516129032 73 34 81 4 29 229 237 306 XP_001709467.2 VSP [Giardia intestinalis] diamond 219 56.2 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;