contig_metadata
11 rows where bioproject = "PRJNA1144090", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4114451 | 4114451 | PRJNA1144090_P_NODE_55804_length_340_cov_2.037453_g55269_i0 | PRJNA1144090 | 55804 | 340 | 2.037453 | 6.9273402 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g55269 | i0 | 100 | 0.423529411764706 | 29 | 0 | 9 | 0 | 215 | 243 | 7334695 | 7334667 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 144 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 26785837 | 26785837 | PRJNA1144090_P_NODE_60641_length_326_cov_1.561265_g60106_i0 | PRJNA1144090 | 60641 | 326 | 1.561265 | 5.0897239 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 47.8 | 0.00173 | NR | HKV51836.1 | 2026741 | g60106 | i0 | 45 | 0.552147239263804 | 60 | 30 | 53.4 | 2 | 142 | 315 | 895 | 953 | HKV51836.1 ankyrin repeat domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 180 | 47.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 26943832 | 26943832 | PRJNA1144090_P_NODE_52922_length_350_cov_1.808664_g52387_i0 | PRJNA1144090 | 52922 | 350 | 1.808664 | 6.330324 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 75.1 | 5.44e-13 | NR | PYP23140.1 | 2026742 | g52387 | i0 | 39.1 | 3.94285714285714 | 115 | 55 | 98.6 | 1 | 6 | 350 | 24 | 123 | PYP23140.1 MAG: sodium-translocating pyrophosphatase, partial [Gemmatimonadota bacterium] | diamond | 1380 | 75.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 27702649 | 27702649 | PRJNA1144090_P_NODE_59264_length_330_cov_1.198444_g58729_i0 | PRJNA1144090 | 59264 | 330 | 1.198444 | 3.9548652 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 69.3 | 4.79e-11 | NR | HMA01782.1 | 2026741 | g58729 | i0 | 35.7 | 5.09090909090909 | 112 | 63 | 97.3 | 3 | 5 | 325 | 537 | 644 | HMA01782.1 serine hydrolase [Gemmatimonadaceae bacterium] | diamond | 1680 | 69.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28081109 | 28081109 | PRJNA1144090_P_NODE_60945_length_325_cov_1.813492_g60410_i0 | PRJNA1144090 | 60945 | 325 | 1.813492 | 5.893849 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 82.8 | 2.52e-16 | NR | MEK6609544.1 | 2026742 | g60410 | i0 | 45.3 | 3.87692307692308 | 106 | 52 | 97.8 | 3 | 320 | 3 | 21 | 120 | MEK6609544.1 malate synthase A [Gemmatimonadota bacterium] | diamond | 1260 | 82.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28333769 | 28333769 | PRJNA1144090_P_NODE_50186_length_360_cov_2.554007_g49651_i0 | PRJNA1144090 | 50186 | 360 | 2.554007 | 9.1944252 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 164 | 1.66e-44 | NR | HXT48020.1 | 2026741 | g49651 | i0 | 68.8 | 7.44166666666667 | 112 | 35 | 93.3 | 0 | 359 | 24 | 618 | 729 | HXT48020.1 aminomethyl-transferring glycine dehydrogenase [Gemmatimonadaceae bacterium] | diamond | 2679 | 164 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29218014 | 29218014 | PRJNA1144090_P_NODE_100789_length_250_cov_0.870056_g100254_i0 | PRJNA1144090 | 100789 | 250 | 0.870056 | 2.17514 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 85.9 | 9.89e-18 | NR | MDT8370069.1 | 2910168 | g100254 | i0 | 51.2 | 2.004 | 82 | 36 | 98.4 | 3 | 250 | 5 | 128 | 205 | MDT8370069.1 peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein [Longimicrobiales bacterium] | diamond | 501 | 85.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 29312637 | 29312637 | PRJNA1144090_P_NODE_91649_length_262_cov_1.624339_g91114_i0 | PRJNA1144090 | 91649 | 262 | 1.624339 | 4.25576818 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 62.4 | 3.75e-9 | NR | MCH9015900.1 | 2026742 | g91114 | i0 | 49.4 | 1.77480916030534 | 77 | 35 | 85.9 | 2 | 227 | 3 | 114 | 188 | MCH9015900.1 SDR family oxidoreductase [Gemmatimonadota bacterium] | diamond | 465 | 62.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30659740 | 30659740 | PRJNA1144090_P_NODE_114773_length_242_cov_0.911243_g114238_i0 | PRJNA1144090 | 114773 | 242 | 0.911243 | 2.20520806 | Gemmatimonas | 173479 | Bacteria | Bacteria | 146 | 2.06e-39 | NR | WP_012682223.1 | 173480 | g114238 | i0 | 82.3 | 14.8636363636364 | 79 | 14 | 97.9 | 0 | 242 | 6 | 107 | 185 | WP_012682223.1 methionine--tRNA ligase [Gemmatimonas aurantiaca] | diamond | 3597 | 147 | 0.993197278911565 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 30860359 | 30860359 | PRJNA1144090_P_NODE_110314_length_244_cov_1.801170_g109779_i0 | PRJNA1144090 | 110314 | 244 | 1.80117 | 4.3948548 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 46.6 | 0.00141 | NR | HET7461886.1 | 2029185 | g109779 | i0 | 44.4 | 1.34016393442623 | 54 | 26 | 61.5 | 1 | 242 | 93 | 7 | 60 | HET7461886.1 zinc ribbon domain-containing protein [Longimicrobium sp.] | diamond | 327 | 46.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 32220285 | 32220285 | PRJNA1144090_P_NODE_75578_length_290_cov_2.654378_g75043_i0 | PRJNA1144090 | 75578 | 290 | 2.654378 | 7.6976962 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 90.5 | 8.44e-19 | NR | HEX9488130.1 | 2448054 | g75043 | i0 | 41.7 | 3.97241379310345 | 96 | 55 | 99.3 | 1 | 290 | 3 | 206 | 300 | HEX9488130.1 multicopper oxidase family protein [Gemmatimonadales bacterium] | diamond | 1152 | 90.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;