RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1144090", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1144090 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27070500 27070500 PRJNA1144090_P_NODE_88942_length_266_cov_1.994819_g88407_i0 PRJNA1144090 88942 266 1.994819 5.30621854 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 50.4 9.85e-5   NR HVR34376.1 2072417 g88407 i0 38.4 1.63533834586466 73 42 82.3 2 10 228 1050 1119 HVR34376.1 lamin tail domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 435 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31766158 31766158 PRJNA1144090_P_NODE_58457_length_332_cov_1.787645_g57922_i0 PRJNA1144090 58457 332 1.787645 5.9349814 root 1 Root_unresolved Root_unresolved 105 2.7999999999999998e-24   NR HEX7786022.1 2072417 g57922 i0 53.1 9.10843373493976 96 44 86.7 1 1 288 326 420 HEX7786022.1 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [Candidatus Methylomirabilota bacterium] diamond 3024 105 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;