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contig_metadata

3 rows where bioproject = "PRJNA1143173" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1143173 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28701733 28701733 PRJNA1143173_P_NODE_39067_length_229_cov_7.833333_g39041_i0 PRJNA1143173 39067 229 7.833333 17.93833257 root 1 Root_unresolved Root_unresolved 44.3 0.00849   NR PKK86187.1 2013852 g39041 i0 52.5 1.58515283842795 40 19 52.4 0 96 215 1 40 PKK86187.1 MAG: ATPase [Thermoplasmata archaeon HGW-Thermoplasmata-1] diamond 363 44.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon HGW-Thermoplasmata-1
28744204 28744204 PRJNA1143173_P_NODE_42267_length_213_cov_4.821429_g42241_i0 PRJNA1143173 42267 213 4.821429 10.26964377 Thermoplasmatota archaeon 2806419 Archaea Archaea 59.3 3.73e-8   NR HEX9709781.1 2806419 g42241 i0 46.2 0.915492957746479 65 35 91.5 0 195 1 957 1021 HEX9709781.1 isoleucine--tRNA ligase [Thermoplasmatota archaeon] diamond 195 59.3 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29711638 29711638 PRJNA1143173_P_NODE_36750_length_238_cov_3.387879_g36724_i0 PRJNA1143173 36750 238 3.387879 8.06315202 root 1 Root_unresolved Root_unresolved 63.9 1.15e-9   NR HKZ47339.1 1906666 g36724 i0 61.7 5.8109243697479 47 18 59.2 0 143 3 7 53 HKZ47339.1 M1 family metallopeptidase [Thermoplasmata archaeon] diamond 1383 64.3 0.993779160186625 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;