RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1143173" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1143173 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29711633 29711633 PRJNA1143173_P_NODE_14870_length_299_cov_2.867257_g14844_i0 PRJNA1143173 14870 299 2.867257 8.57309843 Philodinidae 44580 Rotifera other_Eukaryota 52.8 1.86e-5   NR CAF1070528.1 392030 g14844 i0 40.6 5.66889632107023 64 38 64.2 0 293 102 230 293 CAF1070528.1 unnamed protein product [Rotaria magnacalcarata] diamond 1695 52.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
30323747 30323747 PRJNA1143173_P_NODE_24732_length_273_cov_3.095000_g24706_i0 PRJNA1143173 24732 273 3.095 8.44935 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 58.5 4.79e-8   NR CAF0898772.1 104777 g24706 i0 45.2 0.681318681318681 62 34 68.1 0 80 265 121 182 CAF0898772.1 unnamed protein product, partial [Brachionus calyciflorus] diamond 186 58.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;