RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1143173", tax_phylum = "Nucleocytoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Nucleocytoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1143173 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30344391 30344391 PRJNA1143173_P_NODE_29792_length_258_cov_5.481081_g29766_i0 PRJNA1143173 29792 258 5.481081 14.14118898 Mimiviridae 549779 Viruses Viruses 102 3.309999999999999e-23   NR YP_007354233.1 1269028 g29766 i0 57.5 2.03488372093023 87 35 98.8 2 2 256 651 737 YP_007354233.1 Glycosyltransferase family 25 fused to procollagen lysine 2-oxoglutarate 5-dioxygenase [Acanthamoeba polyphaga moumouvirus] diamond 525 102 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus moumou
31397771 31397771 PRJNA1143173_P_NODE_30136_length_257_cov_5.418478_g30110_i0 PRJNA1143173 30136 257 5.418478 13.92548846 Bodo saltans virus 2024608 Viruses Viruses 46.6 0.00196   NR YP_010778407.1 2024608 g30110 i0 42.9 1.59922178988327 70 36 81.7 2 248 39 854 919 YP_010778407.1 primase-helicase [Bodo saltans virus] diamond 411 46.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
32882863 32882863 PRJNA1143173_P_NODE_20980_length_284_cov_3.824645_g20954_i0 PRJNA1143173 20980 284 3.824645 10.8619918 Fadolivirus algeromassiliense 3060017 Viruses Viruses 65.1 8.31e-10   NR YP_010803310.1 3060017 g20954 i0 38.2 1.07746478873239 102 41 86.6 4 34 279 442 541 YP_010803310.1 hypothetical protein QKU48_gp0427 [Fadolivirus algeromassiliense] diamond 306 65.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;