RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1143173" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1143173 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28038697 28038697 PRJNA1143173_P_NODE_40025_length_226_cov_2.784314_g39999_i0 PRJNA1143173 40025 226 2.784314 6.29254964 Bacillati 1783272 Bacteria Bacteria 89.4 1.14e-18   NR HEY7037870.1 2072417 g39999 i0 58.1 3.92920353982301 74 31 98.2 0 3 224 968 1041 HEY7037870.1 cytochrome P450 [Candidatus Methylomirabilota bacterium] diamond 888 89.7 0.996655518394649 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29123360 29123360 PRJNA1143173_P_NODE_24469_length_274_cov_1.751244_g24443_i0 PRJNA1143173 24469 274 1.751244 4.79840856 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 168 4.52e-47   NR HWN94018.1 2072417 g24443 i0 89.5 0.941605839416058 86 9 94.2 0 269 12 387 472 HWN94018.1 lamin tail domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 258 168 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;