RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

36 rows where bioproject = "PRJNA1143173" and tax_phylum = "Armatimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 36 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1143173 · 36 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4113263 4113263 PRJNA1143173_P_NODE_25084_length_272_cov_3.035176_g25058_i0 PRJNA1143173 25084 272 3.035176 8.25567872 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 144 5.76e-40   NR MCW5941898.1 2682144 g25058 i0 74.4 3.97058823529412 90 23 99.3 0 2 271 97 186 MCW5941898.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD [Fimbriimonadaceae bacterium] diamond 1080 144 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
5389507 5389507 PRJNA1143173_P_NODE_29705_length_258_cov_8.545946_g29679_i0 PRJNA1143173 29705 258 8.545946 22.04854068 Bacteria 2 Bacteria Bacteria 130 9.03e-36   NR MBS1717464.1 2033014 g29679 i0 77.8 7.62790697674419 81 18 94.2 0 253 11 119 199 MBS1717464.1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [Armatimonadota bacterium] diamond 1968 130 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
12511413 12511413 PRJNA1143173_P_NODE_26190_length_269_cov_2.020408_g26164_i0 PRJNA1143173 26190 269 2.020408 5.43489752 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 164 1e-47   NR WP_025225527.1 1005039 g26164 i0 89.9 1.97397769516729 89 9 99.3 0 267 1 54 142 WP_025225527.1 aldo/keto reductase [Fimbriimonas ginsengisoli] diamond 531 164 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26785756 26785756 PRJNA1143173_P_NODE_38301_length_232_cov_6.157233_g38275_i0 PRJNA1143173 38301 232 6.157233 14.28478056 Fimbriimonas sp. 1936159 Bacteria Bacteria 102 2.02e-25   NR MDR3690366.1 1936159 g38275 i0 63.2 0.982758620689655 76 28 98.3 0 4 231 79 154 MDR3690366.1 rod shape-determining protein MreD [Fimbriimonas sp.] diamond 228 102 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
27038756 27038756 PRJNA1143173_P_NODE_21082_length_284_cov_1.374408_g21056_i0 PRJNA1143173 21082 284 1.374408 3.90331872 Fimbriimonas sp. 1936159 Bacteria Bacteria 98.2 1.77e-22   NR MDR3690437.1 1936159 g21056 i0 54.3 0.992957746478873 94 41 99.3 1 3 284 125 216 MDR3690437.1 hypothetical protein [Fimbriimonas sp.] diamond 282 98.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
27101937 27101937 PRJNA1143173_P_NODE_41342_length_218_cov_9.393103_g41316_i0 PRJNA1143173 41342 218 9.393103 20.47696454 Fimbriimonas sp. 1936159 Bacteria Bacteria 92.8 4.64e-21   NR HEY0867059.1 1936159 g41316 i0 61.8 0.935779816513762 68 26 93.6 0 15 218 2 69 HEY0867059.1 ChbG/HpnK family deacetylase [Fimbriimonas sp.] diamond 204 92.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
27228361 27228361 PRJNA1143173_P_NODE_22283_length_280_cov_3.845411_g22257_i0 PRJNA1143173 22283 280 3.845411 10.7671508 Armatimonadota bacterium 2033014 Bacteria Bacteria 103 1.57e-24   NR MBS1717956.1 2033014 g22257 i0 53.3 0.985714285714286 92 42 98.6 1 1 276 117 207 MBS1717956.1 S1/P1 nuclease [Armatimonadota bacterium] diamond 276 103 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27355078 27355078 PRJNA1143173_P_NODE_39923_length_226_cov_5.130719_g39897_i0 PRJNA1143173 39923 226 5.130719 11.59542494 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 47.8 2.11e-4   NR MBC8063549.1 2682144 g39897 i0 100 0.504424778761062 19 0 25.2 0 226 170 136 154 MBC8063549.1 DinB family protein [Fimbriimonadaceae bacterium] diamond 114 47.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27912067 27912067 PRJNA1143173_P_NODE_41185_length_219_cov_8.280822_g41159_i0 PRJNA1143173 41185 219 8.280822 18.13500018 Fimbriimonas 1005038 Bacteria Bacteria 98.2 9.8e-23   NR HEY0867773.1 1936159 g41159 i0 63.4 6.57534246575342 71 26 97.3 0 217 5 7 77 HEY0867773.1 hypothetical protein [Fimbriimonas sp.] diamond 1440 98.6 0.995943204868154 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28196322 28196322 PRJNA1143173_P_NODE_44586_length_197_cov_17.620968_g44560_i0 PRJNA1143173 44586 197 17.620968 34.71330696 Fimbriimonas 1005038 Bacteria Bacteria 62.8 1.71e-9   NR HWD39143.1 1936159 g44560 i0 90.3 3.15228426395939 31 3 47.2 0 195 103 448 478 HWD39143.1 F0F1 ATP synthase subunit beta [Fimbriimonas sp.] diamond 621 63.2 0.993670886075949 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28270391 28270391 PRJNA1143173_P_NODE_8506_length_310_cov_6.569620_g8480_i0 PRJNA1143173 8506 310 6.56962 20.365822 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 92.4 9.5e-20   NR MBI1755655.1 1005039 g8480 i0 86 1.93548387096774 50 7 48.4 0 161 310 107 156 MBI1755655.1 dTDP-glucose 4,6-dehydratase [Fimbriimonas ginsengisoli] diamond 600 92.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
28302110 28302110 PRJNA1143173_P_NODE_23506_length_276_cov_7.389163_g23480_i0 PRJNA1143173 23506 276 7.389163 20.39408988 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 173 2.89e-50   NR HMS53788.1 2682144 g23480 i0 87.9 0.989130434782609 91 11 98.9 0 2 274 43 133 HMS53788.1 NADH-quinone oxidoreductase subunit NuoH [Fimbriimonadaceae bacterium] diamond 273 173 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28543999 28543999 PRJNA1143173_P_NODE_18147_length_292_cov_6.648402_g18121_i0 PRJNA1143173 18147 292 6.648402 19.41333384 Fimbriimonas 1005038 Bacteria Bacteria 81.3 1.63e-15   NR HSI72997.1 1936159 g18121 i0 80 4.10958904109589 50 10 51.4 0 2 151 154 203 HSI72997.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Fimbriimonas sp.] diamond 1200 81.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28986052 28986052 PRJNA1143173_P_NODE_38848_length_230_cov_6.184713_g38822_i0 PRJNA1143173 38848 230 6.184713 14.2248399 Bacteria 2 Bacteria Bacteria 48.5 2.86e-4   NR MCC2672617.1 2033014 g38822 i0 63.4 1.47391304347826 41 14 53.5 1 123 1 5 44 MCC2672617.1 hypothetical protein [Armatimonadota bacterium] diamond 339 48.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28997078 28997078 PRJNA1143173_P_NODE_15248_length_298_cov_6.391111_g15222_i0 PRJNA1143173 15248 298 6.391111 19.04551078 Fimbriimonas sp. 1936159 Bacteria Bacteria 135 7.12e-35   NR HEY0866962.1 1936159 g15222 i0 56.4 2.67785234899329 133 23 98.7 1 296 3 401 533 HEY0866962.1 transposase [Fimbriimonas sp.] diamond 798 135 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
29154888 29154888 PRJNA1143173_P_NODE_10789_length_310_cov_3.641350_g10763_i0 PRJNA1143173 10789 310 3.64135 11.288185 Armatimonadota bacterium 2033014 Bacteria Bacteria 89.7 2.66e-18   NR MBI1333997.1 2033014 g10763 i0 67.3 1.59677419354839 55 18 53.2 0 1 165 412 466 MBI1333997.1 alpha-glucan family phosphorylase [Armatimonadota bacterium] diamond 495 89.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29249236 29249236 PRJNA1143173_P_NODE_40629_length_222_cov_8.872483_g40603_i0 PRJNA1143173 40629 222 8.872483 19.69691226 Armatimonadota bacterium 2033014 Bacteria Bacteria 94.7 1.81e-21   NR MES2463050.1 2033014 g40603 i0 73.1 0.905405405405405 67 18 90.5 0 201 1 1 67 MES2463050.1 ABC transporter ATP-binding protein [Armatimonadota bacterium] diamond 201 94.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29312530 29312530 PRJNA1143173_P_NODE_29709_length_258_cov_8.145946_g29683_i0 PRJNA1143173 29709 258 8.145946 21.01654068 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 119 1.2e-30   NR MFN8220849.1 2682145 g29683 i0 65 0.930232558139535 80 28 93 0 1 240 210 289 MFN8220849.1 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase [Fimbriimonadales bacterium] diamond 240 119 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29438408 29438408 PRJNA1143173_P_NODE_10650_length_310_cov_3.759494_g10624_i0 PRJNA1143173 10650 310 3.759494 11.6544314 Armatimonadota bacterium 2033014 Bacteria Bacteria 56.2 3.88e-7   NR MBS1714925.1 2033014 g10624 i0 40.8 0.735483870967742 76 39 68.7 2 2 214 87 161 MBS1714925.1 DUF4411 family protein [Armatimonadota bacterium] diamond 228 56.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29470087 29470087 PRJNA1143173_P_NODE_8330_length_310_cov_6.924051_g8304_i0 PRJNA1143173 8330 310 6.924051 21.4645581 Armatimonadota bacterium 2033014 Bacteria Bacteria 89 4.95e-18   NR MCC2667623.1 2033014 g8304 i0 80 1.45161290322581 50 10 48.4 0 150 1 748 797 MCC2667623.1 hypothetical protein [Armatimonadota bacterium] diamond 450 89 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29722678 29722678 PRJNA1143173_P_NODE_22670_length_279_cov_3.140777_g22644_i0 PRJNA1143173 22670 279 3.140777 8.76276783 Armatimonadota bacterium 2033014 Bacteria Bacteria 94.4 4.09e-20   NR MBS1718732.1 2033014 g22644 i0 44 0.978494623655914 91 51 97.8 0 6 278 304 394 MBS1718732.1 YkgJ family cysteine cluster protein [Armatimonadota bacterium] diamond 273 94.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29881056 29881056 PRJNA1143173_P_NODE_26431_length_268_cov_3.753846_g26405_i0 PRJNA1143173 26431 268 3.753846 10.06030728 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 68.2 5.28e-12   NR HMS56116.1 2682144 g26405 i0 42.3 0.794776119402985 71 41 79.5 0 267 55 79 149 HMS56116.1 DinB family protein [Fimbriimonadaceae bacterium] diamond 213 68.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30090858 30090858 PRJNA1143173_P_NODE_33332_length_248_cov_4.102857_g33306_i0 PRJNA1143173 33332 248 4.102857 10.17508536 FCB group 1783270 Bacteria Bacteria 59.3 5.73e-8   NR MEI6502397.1 2033014 g33306 i0 55.8 1.5 52 22 62.9 1 34 189 557 607 MEI6502397.1 right-handed parallel beta-helix repeat-containing protein [Armatimonadota bacterium] diamond 372 59.7 0.993299832495812 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30564627 30564627 PRJNA1143173_P_NODE_11133_length_310_cov_3.333333_g11107_i0 PRJNA1143173 11133 310 3.333333 10.3333323 Fimbriimonas 1005038 Bacteria Bacteria 85.5 5.05e-17   NR HEY0868389.1 1936159 g11107 i0 81.6 1.42258064516129 49 9 47.4 0 2 148 13 61 HEY0868389.1 prepilin peptidase [Fimbriimonas sp.] diamond 441 86.3 0.990730011587486 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30670655 30670655 PRJNA1143173_P_NODE_40833_length_221_cov_8.317568_g40807_i0 PRJNA1143173 40833 221 8.317568 18.38182528 Armatimonadota bacterium 2033014 Bacteria Bacteria 122 1.41e-30   NR MBS1716096.1 2033014 g40807 i0 77.1 1.90045248868778 70 16 95 0 8 217 406 475 MBS1716096.1 aspartate--tRNA ligase [Armatimonadota bacterium] diamond 420 122 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30828660 30828660 PRJNA1143173_P_NODE_11474_length_310_cov_3.004219_g11448_i0 PRJNA1143173 11474 310 3.004219 9.3130789 Armatimonadota bacterium 2033014 Bacteria Bacteria 47.8 0.00114   NR HID06579.1 2033014 g11448 i0 54.5 0.425806451612903 44 20 42.6 0 144 13 53 96 HID06579.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 132 47.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31007325 31007325 PRJNA1143173_P_NODE_9874_length_310_cov_4.502110_g9848_i0 PRJNA1143173 9874 310 4.50211 13.956541 Armatimonas 1042315 Bacteria Bacteria 94 8.59e-20   NR WP_184203488.1 685828 g9848 i0 72.4 2.77741935483871 58 10 56.1 1 136 309 13 64 WP_184203488.1 redoxin domain-containing protein [Armatimonas rosea] diamond 861 94 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
31101955 31101955 PRJNA1143173_P_NODE_20255_length_286_cov_4.920188_g20229_i0 PRJNA1143173 20255 286 4.920188 14.07173768 Fimbriimonas 1005038 Bacteria Bacteria 102 2.25e-24   NR MDR3691419.1 1936159 g20229 i0 74.6 2.81118881118881 67 17 70.3 0 3 203 198 264 MDR3691419.1 DUF2231 domain-containing protein [Fimbriimonas sp.] diamond 804 103 0.990291262135922 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31513359 31513359 PRJNA1143173_P_NODE_29116_length_260_cov_4.636364_g29090_i0 PRJNA1143173 29116 260 4.636364 12.0545464 Fimbriimonas 1005038 Bacteria Bacteria 120 5.57e-30   NR MDR3690796.1 1936159 g29090 i0 85.1 1.54615384615385 67 10 77.3 0 58 258 25 91 MDR3690796.1 argininosuccinate lyase [Fimbriimonas sp.] diamond 402 120 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31713927 31713927 PRJNA1143173_P_NODE_31677_length_253_cov_2.722222_g31651_i0 PRJNA1143173 31677 253 2.722222 6.88722166 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 96.3 6.3200000000000005e-21   NR MCB8933819.1 2739509 g31651 i0 61 0.972332015810277 82 32 97.2 0 246 1 710 791 MCB8933819.1 efflux RND transporter permease subunit [Chthonomonadaceae bacterium] diamond 246 96.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31860915 31860915 PRJNA1143173_P_NODE_11537_length_310_cov_2.945148_g11511_i0 PRJNA1143173 11537 310 2.945148 9.1299588 Fimbriimonas 1005038 Bacteria Bacteria 85.9 2.05e-17   NR HLO98085.1 1936159 g11511 i0 77.2 2.20645161290323 57 13 55.2 0 138 308 229 285 HLO98085.1 DNA gyrase subunit A [Fimbriimonas sp.] diamond 684 85.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31871989 31871989 PRJNA1143173_P_NODE_11557_length_310_cov_2.932489_g11531_i0 PRJNA1143173 11557 310 2.932489 9.0907159 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.7 1.35e-13   NR MDQ2687434.1 2033014 g11531 i0 77.3 0.425806451612903 44 10 42.6 0 146 15 9 52 MDQ2687434.1 hypothetical protein [Armatimonadota bacterium] diamond 132 74.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31998656 31998656 PRJNA1143173_P_NODE_41418_length_218_cov_5.786207_g41392_i0 PRJNA1143173 41418 218 5.786207 12.61393126 Armatimonadota bacterium 2033014 Bacteria Bacteria 125 7.22e-33   NR MBS1722900.1 2033014 g41392 i0 81.7 0.977064220183486 71 13 97.7 0 3 215 94 164 MBS1722900.1 hypothetical protein [Armatimonadota bacterium] diamond 213 125 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32188592 32188592 PRJNA1143173_P_NODE_5658_length_360_cov_13.142857_g5632_i0 PRJNA1143173 5658 360 13.142857 47.3142852 Armatimonadota bacterium 2033014 Bacteria Bacteria 64.7 7.76e-11   NR MEI6503254.1 2033014 g5632 i0 55.8 0.433333333333333 52 23 43.3 0 174 329 1 52 MEI6503254.1 hypothetical protein [Armatimonadota bacterium] diamond 156 64.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32441930 32441930 PRJNA1143173_P_NODE_40519_length_223_cov_5.900000_g40493_i0 PRJNA1143173 40519 223 5.9 13.157 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 88.6 1.65e-19   NR MFN8140521.1 2682145 g40493 i0 56.9 0.968609865470852 72 31 96.9 0 217 2 48 119 MFN8140521.1 ubiquinone/menaquinone biosynthesis methyltransferase [Fimbriimonadales bacterium] diamond 216 88.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
32662431 32662431 PRJNA1143173_P_NODE_34520_length_245_cov_1.412791_g34494_i0 PRJNA1143173 34520 245 1.412791 3.46133795 Fimbriimonas sp. 1936159 Bacteria Bacteria 97.8 2.78e-22   NR MDR3690537.1 1936159 g34494 i0 67.8 0.722448979591837 59 19 72.2 0 64 240 117 175 MDR3690537.1 ABC transporter permease subunit [Fimbriimonas sp.] diamond 177 97.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;