RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1143173", tax_kingdom = "Thermoproteati" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA1143173 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28775696 28775696 PRJNA1143173_P_NODE_44827_length_196_cov_5.634146_g44801_i0 PRJNA1143173 44827 196 5.634146 11.04292616 Nitrososphaerales archaeon 2268197 Archaea Archaea 65.5 7.57e-11   NR MEM2760206.1 2268197 g44801 i0 50.7 1.02551020408163 67 31 99.5 1 1 195 101 167 MEM2760206.1 class II aldolase/adducin family protein [Nitrososphaerales archaeon] diamond 201 65.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
30101866 30101866 PRJNA1143173_P_NODE_44592_length_197_cov_14.991935_g44566_i0 PRJNA1143173 44592 197 14.991935 29.53411195 Nitrososphaerales archaeon 2268197 Archaea Archaea 46.6 8.94e-4   NR MFI5405082.1 2268197 g44566 i0 44.4 0.685279187817259 45 25 68.5 0 6 140 756 800 MFI5405082.1 LamG domain-containing protein [Nitrososphaerales archaeon] diamond 135 46.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
30375817 30375817 PRJNA1143173_P_NODE_2812_length_472_cov_3.859649_g2786_i0 PRJNA1143173 2812 472 3.859649 18.21754328 root 1 Root_unresolved Root_unresolved 55.5 1.45e-5   NR HEY1249177.1 1971748 g2786 i0 30.4 4.36016949152542 161 107 99.2 2 5 472 223 383 HEY1249177.1 hypothetical protein [Nitrososphaera sp.] diamond 2058 55.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;