RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA1143173", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA1143173 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4113276 4113276 PRJNA1143173_P_NODE_25764_length_270_cov_3.015228_g25738_i0 PRJNA1143173 25764 270 3.015228 8.1411156 Rhizopus delemar 936053 Fungi Fungi 394 3.57e-105   NTclustered gi|2797485625|ref|XM_067671552.1| 246409 g25738 i0 96.25 0.888888888888889 240 9 89 0 31 270 790 1029 Rhizopus delemar RA 99-880 uncharacterized protein (RO3G_16968), partial mRNA blastn 240 394 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
27153819 27153819 PRJNA1143173_P_NODE_10842_length_310_cov_3.603376_g10816_i0 PRJNA1143173 10842 310 3.603376 11.1704656 root 1 Root_unresolved Root_unresolved 76.6 9.69e-14   NR CAG8677530.1 984092 g10816 i0 62 2.39032258064516 50 19 48.4 0 2 151 117 166 CAG8677530.1 1007_t:CDS:2, partial [Entrophospora candida] diamond 741 76.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora candida
28196320 28196320 PRJNA1143173_P_NODE_29946_length_258_cov_2.789189_g29920_i0 PRJNA1143173 29946 258 2.789189 7.19610762 root 1 Root_unresolved Root_unresolved 170 6.29e-53   NR KAG1249440.1 64495 g29920 i0 100 2 86 0 100 0 1 258 15 100 KAG1249440.1 hypothetical protein G6F65_019129 [Rhizopus arrhizus] diamond 516 170 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
28575283 28575283 PRJNA1143173_P_NODE_8287_length_310_cov_7.000000_g8261_i0 PRJNA1143173 8287 310 7 21.7 Opisthokonta 33154 Fungi Fungi 82.8 7.02e-16   NR KAG2222713.1 1195481 g8261 i0 78 2.90322580645161 50 11 48.4 0 309 160 312 361 KAG2222713.1 hypothetical protein INT45_011201 [Circinella minor] diamond 900 82.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Circinella Circinella minor
30702311 30702311 PRJNA1143173_P_NODE_30454_length_256_cov_6.448087_g30428_i0 PRJNA1143173 30454 256 6.448087 16.50710272 Diversispora epigaea 1348612 Fungi Fungi 55.8 9.98e-7   NR RHZ57015.1 1348612 g30428 i0 92.9 0.65625 28 2 32.8 0 221 138 179 206 RHZ57015.1 hypothetical protein Glove_395g56 [Diversispora epigaea] diamond 168 55.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora epigaea
32525868 32525868 PRJNA1143173_P_NODE_24479_length_274_cov_1.457711_g24453_i0 PRJNA1143173 24479 274 1.457711 3.99412814 Fungi 4751 Fungi Fungi 77.4 3.3e-14   NR RIA97899.1 658196 g24453 i0 42 2.8029197080292 88 51 96.4 0 272 9 147 234 RIA97899.1 hypothetical protein C1645_751090 [Glomus cerebriforme] diamond 768 77.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Glomus Glomus cerebriforme

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;