RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1143173", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1143173 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6664298 6664298 PRJNA1143173_P_NODE_33006_length_249_cov_3.960227_g32980_i0 PRJNA1143173 33006 249 3.960227 9.86096523 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|2782844021|ref|XM_067055925.1| 252671 g32980 i0 96.774 0.124497991967871 31 1 12 0 195 225 884 914 PREDICTED: Clytia hemisphaerica ubiquitin-conjugating enzyme E2 A (LOC136799236), mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
15589387 15589387 PRJNA1143173_P_NODE_37733_length_234_cov_5.844720_g37707_i0 PRJNA1143173 37733 234 5.84472 13.6766448 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 52.8 0.021   NTclustered gi|2519010821|ref|XM_057456849.1| 13093 g37707 i0 100 0.11965811965812 28 0 12 0 123 150 766 739 PREDICTED: Hydractinia symbiolongicarpus AN1-type zinc finger protein 2A-like (LOC130654294), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;