RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1143173", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1143173 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6664325 6664325 PRJNA1143173_P_NODE_3446_length_442_cov_4.907859_g3420_i0 PRJNA1143173 3446 442 4.907859 21.69273678 Hirudo verbana 311461 Annelida Annelida 58.4 0.001   NTclustered gi|2918369643|emb|OZ237784.1| 311461 g3420 i0 90.909 0.0995475113122172 44 3 10 1 248 291 10019064 10019022 Hirudo verbana genome assembly, chromosome: 6 blastn 44 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
6664442 6664442 PRJNA1143173_P_NODE_39666_length_227_cov_5.279221_g39640_i0 PRJNA1143173 39666 227 5.279221 11.98383167 Helobdella robusta 6412 Annelida Annelida 58.4 4.35e-4   NTclustered gi|86203202|gb|AC171128.2| 6412 g39640 i0 100 0.418502202643172 31 0 14 0 123 153 4116 4086 Helobdella robusta clone CH306-1A10, complete sequence blastn 95 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;