RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1143173", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1143173 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26690571 26690571 PRJNA1143173_P_NODE_8481_length_310_cov_6.616034_g8455_i0 PRJNA1143173 8481 310 6.616034 20.5097054 Minisyncoccota bacterium 2053589 Bacteria Bacteria 101 3.77e-25   NR MDP6249907.1 2053589 g8455 i0 54.4 2.60322580645161 90 31 77.4 1 307 68 28 117 MDP6249907.1 ATP-dependent Clp protease proteolytic subunit [Candidatus Paceibacterota bacterium] diamond 807 101 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27828559 27828559 PRJNA1143173_P_NODE_38584_length_231_cov_5.886076_g38558_i0 PRJNA1143173 38584 231 5.886076 13.59683556 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.1 1.03e-8   NR MDR3571231.1 2053589 g38558 i0 43.8 0.948051948051948 73 40 94.8 1 227 9 5 76 MDR3571231.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 219 60.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31397777 31397777 PRJNA1143173_P_NODE_38276_length_232_cov_6.981132_g38250_i0 PRJNA1143173 38276 232 6.981132 16.19622624 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.2 5.88e-7   NR MFA6253931.1 2053589 g38250 i0 51.8 0.724137931034483 56 22 65.9 2 1 153 17 72 MFA6253931.1 glycosyltransferase [Candidatus Paceibacterota bacterium] diamond 168 56.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;