RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1143173", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1143173 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30007416 30007416 PRJNA1143173_P_NODE_42391_length_212_cov_5.431655_g42365_i0 PRJNA1143173 42391 212 5.431655 11.5151086 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 60.5 1.35e-8   NR MBI1930658.1 2026781 g42365 i0 60 0.778301886792453 55 16 77.8 2 205 41 357 405 MBI1930658.1 IS200/IS605 family element transposase accessory protein TnpB [Candidatus Poribacteria bacterium] diamond 165 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30912669 30912669 PRJNA1143173_P_NODE_19314_length_289_cov_3.004630_g19288_i0 PRJNA1143173 19314 289 3.00463 8.6833807 Bacteria 2 Bacteria Bacteria 67 1.86e-10   NR MCG9133121.1 2026781 g19288 i0 41.3 3.9757785467128 92 50 95.5 2 286 11 204 291 MCG9133121.1 WD40 repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 1149 67 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;