RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1139127" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1139127 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28775661 28775661 PRJNA1139127_P_NODE_48167_length_243_cov_0.917647_g47674_i0 PRJNA1139127 48167 243 0.917647 2.22988221 Armatimonadota bacterium 2033014 Bacteria Bacteria 111 9.239999999999999e-30   NR MBC8135849.1 2033014 g47674 i0 77.1 1.76543209876543 70 16 86.4 0 21 230 30 99 MBC8135849.1 hypothetical protein [Armatimonadota bacterium] diamond 429 111 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30323722 30323722 PRJNA1139127_P_NODE_36372_length_280_cov_1.125604_g35879_i0 PRJNA1139127 36372 280 1.125604 3.1516912 Armatimonadota bacterium 2033014 Bacteria Bacteria 44.3 0.0164   NR MBS1707683.1 2033014 g35879 i0 38.7 0.664285714285714 62 34 64.3 2 83 262 131 190 MBS1707683.1 M20/M25/M40 family metallo-hydrolase [Armatimonadota bacterium] diamond 186 44.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;