RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1139127" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1139127 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13785624 13785624 PRJNA1139127_P_NODE_26251_length_351_cov_1.111511_g25759_i0 PRJNA1139127 26251 351 1.111511 3.90140361 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.98e-4   NTclustered gi|915002776|ref|XM_013393443.1| 5801 g25759 i0 94.872 9.49287749287749 39 1 11 1 286 323 11084 11046 Eimeria acervulina UBA/TS-N domain-containing protein, putative partial mRNA blastn 3332 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
15588214 15588214 PRJNA1139127_P_NODE_47213_length_245_cov_0.889535_g46720_i0 PRJNA1139127 47213 245 0.889535 2.17936075 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 355 1.51e-93   NTclustered gi|820695469|tpe|LN714488.1| 572307 g46720 i0 93.004 42.8 243 17 99 0 3 245 116359 116601 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 10486 355 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;