contig_metadata
11 rows where bioproject = "PRJNA1139127" and tax_clade = "Sar"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4111990 | 4111990 | PRJNA1139127_P_NODE_13984_length_546_cov_1.564482_g13503_i0 | PRJNA1139127 | 13984 | 546 | 1.564482 | 8.54207172 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 662 | 0 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g13503 | i0 | 89.655 | 1.5952380952381 | 522 | 50 | 95 | 3 | 1 | 520 | 1531 | 1012 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 871 | 662 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 13785624 | 13785624 | PRJNA1139127_P_NODE_26251_length_351_cov_1.111511_g25759_i0 | PRJNA1139127 | 26251 | 351 | 1.111511 | 3.90140361 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 60.2 | 1.98e-4 | NTclustered | gi|915002776|ref|XM_013393443.1| | 5801 | g25759 | i0 | 94.872 | 9.49287749287749 | 39 | 1 | 11 | 1 | 286 | 323 | 11084 | 11046 | Eimeria acervulina UBA/TS-N domain-containing protein, putative partial mRNA | blastn | 3332 | 60.2 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Eimeria | Eimeria acervulina | ||
| 15060003 | 15060003 | PRJNA1139127_P_NODE_43732_length_250_cov_0.875706_g43239_i0 | PRJNA1139127 | 43732 | 250 | 0.875706 | 2.189265 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 451 | 1.91e-122 | NTclustered | gi|1837628855|gb|MN158348.1| | 5909 | g43239 | i0 | 99.2 | 92.464 | 250 | 2 | 100 | 0 | 1 | 250 | 2607 | 2856 | Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 23116 | 451 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena rostrata | ||
| 15588214 | 15588214 | PRJNA1139127_P_NODE_47213_length_245_cov_0.889535_g46720_i0 | PRJNA1139127 | 47213 | 245 | 0.889535 | 2.17936075 | Neospora caninum | 29176 | SAR_Eukaryotes | SAR_Eukaryotes | 355 | 1.51e-93 | NTclustered | gi|820695469|tpe|LN714488.1| | 572307 | g46720 | i0 | 93.004 | 42.8 | 243 | 17 | 99 | 0 | 3 | 245 | 116359 | 116601 | TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome | blastn | 10486 | 355 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Neospora | Neospora caninum | ||
| 18137056 | 18137056 | PRJNA1139127_P_NODE_46555_length_245_cov_2.482558_g46062_i0 | PRJNA1139127 | 46555 | 245 | 2.482558 | 6.0822671 | Synura synuroidea | 47573 | SAR_Eukaryotes | SAR_Eukaryotes | 189 | 1.62e-43 | NTclustered | gi|11466457|ref|NC_002174.1| | 47573 | g46062 | i0 | 82.87 | 21.9632653061224 | 216 | 32 | 87 | 5 | 22 | 235 | 815 | 1027 | Chrysodidymus synuroideus mitochondrion, complete genome | blastn | 5381 | 189 | 1 | Eukaryota | Sar | Synurophyceae | Synurales | Mallomonadaceae | Synura | Synura synuroidea | |||
| 24511059 | 24511059 | PRJNA1139127_P_NODE_30700_length_315_cov_1.285124_g30208_i0 | PRJNA1139127 | 30700 | 315 | 1.285124 | 4.0481406 | Durusdinium trenchii | 1381693 | SAR_Eukaryotes | SAR_Eukaryotes | 122 | 5.26e-33 | NR | CAK9114403.1 | 1381693 | g30208 | i0 | 63.5 | 3.54285714285714 | 96 | 33 | 89.5 | 1 | 282 | 1 | 6 | 101 | CAK9114403.1 40S ribosomal protein S11-2 [Durusdinium trenchii] | diamond | 1116 | 122 | 1 | Eukaryota | Sar | Dinophyceae | Suessiales | Symbiodiniaceae | Durusdinium | Durusdinium trenchii | |||
| 26658643 | 26658643 | PRJNA1139127_P_NODE_36001_length_282_cov_1.110048_g35508_i0 | PRJNA1139127 | 36001 | 282 | 1.110048 | 3.13033536 | Pseudo-nitzschia multistriata | 183589 | SAR_Eukaryotes | SAR_Eukaryotes | 52.8 | 1.87e-5 | NR | VEU37424.1 | 183589 | g35508 | i0 | 56.3 | 0.51063829787234 | 48 | 17 | 51.1 | 1 | 1 | 144 | 1227 | 1270 | VEU37424.1 unnamed protein product [Pseudo-nitzschia multistriata] | diamond | 144 | 52.8 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Pseudo-nitzschia | Pseudo-nitzschia multistriata | ||
| 30228292 | 30228292 | PRJNA1139127_P_NODE_37372_length_274_cov_2.776119_g36879_i0 | PRJNA1139127 | 37372 | 274 | 2.776119 | 7.60656606 | Ochromonadaceae sp. CCMP2298 | 483371 | SAR_Eukaryotes | SAR_Eukaryotes | 63.5 | 7.66e-10 | NR | KAJ1389255.1 | 483371 | g36879 | i0 | 46.7 | 0.656934306569343 | 60 | 32 | 65.7 | 0 | 270 | 91 | 143 | 202 | KAJ1389255.1 hypothetical protein B484DRAFT_459702 [Ochromonadaceae sp. CCMP2298] | diamond | 180 | 63.5 | 1 | Eukaryota | Sar | Synurophyceae | Ochromonadales | Ochromonadaceae | Ochromonadaceae sp. CCMP2298 | ||||
| 30860309 | 30860309 | PRJNA1139127_P_NODE_32974_length_299_cov_3.296460_g32481_i0 | PRJNA1139127 | 32974 | 299 | 3.29646 | 9.8564154 | Chaetoceros tenuissimus | 426638 | SAR_Eukaryotes | SAR_Eukaryotes | 49.7 | 2.74e-4 | NR | GFH58591.1 | 426638 | g32481 | i0 | 34.9 | 0.632107023411371 | 63 | 41 | 63.2 | 0 | 194 | 6 | 10 | 72 | GFH58591.1 hypothetical protein CTEN210_15067 [Chaetoceros tenuissimus] | diamond | 189 | 49.7 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 31397736 | 31397736 | PRJNA1139127_P_NODE_20756_length_413_cov_1.588235_g20265_i0 | PRJNA1139127 | 20756 | 413 | 1.588235 | 6.55941055 | Tetrahymena thermophila SB21 | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 232 | 1.17e-69 | NR | XP_001033325.2 | 312017 | g20265 | i0 | 98.3 | 0.835351089588378 | 115 | 2 | 83.5 | 0 | 69 | 413 | 262 | 376 | XP_001033325.2 kinesin motor catalytic domain protein [Tetrahymena thermophila SB210] | diamond | 345 | 232 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 31461101 | 31461101 | PRJNA1139127_P_NODE_41916_length_253_cov_1.011111_g41423_i0 | PRJNA1139127 | 41916 | 253 | 1.011111 | 2.55811083 | Globisporangium splendens | 82926 | SAR_Eukaryotes | SAR_Eukaryotes | 104 | 2.34e-24 | NR | KAF1330494.1 | 82926 | g41423 | i0 | 59 | 1.96837944664032 | 83 | 34 | 98.4 | 0 | 5 | 253 | 291 | 373 | KAF1330494.1 Adenosine kinase, partial [Globisporangium splendens] | diamond | 498 | 104 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium splendens |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;