RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1139127", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1139127 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9213276 9213276 PRJNA1139127_P_NODE_44408_length_249_cov_0.880682_g43915_i0 PRJNA1139127 44408 249 0.880682 2.19289818 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 119 1.3999999999999996e-29   NR HNX34238.1 2212473 g43915 i0 73.8 1.01204819277108 84 21 100 1 1 249 285 368 HNX34238.1 hypothetical protein [Kiritimatiellia bacterium] diamond 252 119 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31808804 31808804 PRJNA1139127_P_NODE_22357_length_393_cov_1.440625_g21866_i0 PRJNA1139127 22357 393 1.440625 5.66165625 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 70.9 1.92e-11   NR MDD3604725.1 2212473 g21866 i0 72.1 2.61832061068702 43 12 32.8 0 157 285 1 43 MDD3604725.1 MBOAT family protein [Kiritimatiellia bacterium] diamond 1029 70.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;