RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1137393" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1137393 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14313579 14313579 PRJNA1137393_P_NODE_11012_length_250_cov_2.965174_g10496_i0 PRJNA1137393 11012 250 2.965174 7.412935 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 246 9.679999999999999e-61   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g10496 i0 84.646 242.216 254 32 100 7 1 250 161936 162186 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 60554 246 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
23237165 23237165 PRJNA1137393_P_NODE_8419_length_287_cov_2.731092_g7903_i0 PRJNA1137393 8419 287 2.731092 7.83823404 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 398 2.9599999999999997e-106   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g7903 i0 91.667 274.672473867596 288 22 100 2 1 287 161101 161387 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 78831 398 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;