RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1137393", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1137393 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28870366 28870366 PRJNA1137393_P_NODE_55588_length_166_cov_0.888889_g55072_i0 PRJNA1137393 55588 166 0.888889 1.47555574 Fretibacterium sp. OH122 2699746 Bacteria Bacteria 108 6.39e-26   NR WP_124888786.1 2491047 g55072 i0 98.2 0.993975903614458 55 1 99.4 0 2 166 712 766 WP_124888786.1 hydratase [Fretibacterium sp. OH1220_COT-178] diamond 165 108 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium sp. OH1220_COT-178
31608042 31608042 PRJNA1137393_P_NODE_49236_length_167_cov_0.881356_g48720_i0 PRJNA1137393 49236 167 0.881356 1.47186452 Bacteria 2 Bacteria Bacteria 63.5 1.08e-10   NR OPZ34848.1 1852916 g48720 i0 57.4 4.83233532934132 54 23 97 0 167 6 114 167 OPZ34848.1 MAG: hypothetical protein BWY99_02411 [Synergistetes bacterium ADurb.BinA166] diamond 807 63.9 0.993740219092332 Bacteria   Thermotogati Synergistota         Synergistetes bacterium ADurb.BinA166

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;