RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1137393", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 8 ✖

tax_kingdom 1

  • Metazoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1137393 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9212763 9212763 PRJNA1137393_P_NODE_5268_length_382_cov_2.279279_g4752_i0 PRJNA1137393 5268 382 2.279279 8.70684578 Synchaeta grimpei 2576784 Rotifera other_Eukaryota 472 2.3599999999999997e-128   NTclustered gi|1839331003|gb|MK905784.1| 2576784 g4752 i0 89.891 92.7958115183246 366 37 96 0 9 374 627 262 Synchaeta grimpei isolate 140416_NH_Whv_A11 cytochrome c oxidase I (COI) gene, partial cds; mitochondrial blastn 35448 472 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Synchaeta Synchaeta grimpei
20686086 20686086 PRJNA1137393_P_NODE_21957_length_196_cov_1.619048_g21441_i0 PRJNA1137393 21957 196 1.619048 3.17333408 Synchaeta triophthalma 2576788 Rotifera other_Eukaryota 246 7.25e-61   NTclustered gi|1839331029|gb|MK905797.1| 2576788 g21441 i0 89.286 100.188775510204 196 21 100 0 1 196 547 352 Synchaeta triophthalma isolate 140416_NH_A8 cytochrome c oxidase I (COI) gene, partial cds; mitochondrial blastn 19637 246 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Synchaetidae Synchaeta Synchaeta triophthalma
26595329 26595329 PRJNA1137393_P_NODE_67681_length_163_cov_0.912281_g67165_i0 PRJNA1137393 67681 163 0.912281 1.48701803 Adineta steineri 433720 Rotifera other_Eukaryota 76.3 6.85e-15   NR CAF4225657.1 433720 g67165 i0 72.9 1.76687116564417 48 13 88.3 0 162 19 196 243 CAF4225657.1 unnamed protein product, partial [Adineta steineri] diamond 288 76.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
27734103 27734103 PRJNA1137393_P_NODE_45724_length_168_cov_0.873950_g45208_i0 PRJNA1137393 45724 168 0.87395 1.468236 Brachionus angularis 396692 Rotifera other_Eukaryota 72 6.54e-13   NR QUF59458.1 396692 g45208 i0 66.1 1 56 19 100 0 1 168 221 276 QUF59458.1 ATP-binding cassette transporter Abcd2 [Brachionus angularis] diamond 168 72 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
27986379 27986379 PRJNA1137393_P_NODE_24205_length_191_cov_1.380282_g23689_i0 PRJNA1137393 24205 191 1.380282 2.63633862 Rotaria sordida 392033 Rotifera other_Eukaryota 47 5.98e-4   NR CAF0728300.1 392033 g23689 i0 30.6 5.79581151832461 62 43 97.4 0 6 191 579 640 CAF0728300.1 unnamed protein product [Rotaria sordida] diamond 1107 47 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
29722661 29722661 PRJNA1137393_P_NODE_73190_length_162_cov_0.920354_g72674_i0 PRJNA1137393 73190 162 0.920354 1.49097348 Adineta steineri 433720 Rotifera other_Eukaryota 65.1 1.24e-11   NR CAF0730748.1 433720 g72674 i0 58.8 3.51851851851852 51 20 94.4 1 153 1 1 50 CAF0730748.1 unnamed protein product [Adineta steineri] diamond 570 65.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31808796 31808796 PRJNA1137393_P_NODE_61257_length_164_cov_0.904348_g60741_i0 PRJNA1137393 61257 164 0.904348 1.48313072 Adineta ricciae 249248 Rotifera other_Eukaryota 41.6 0.0332   NR CAF1381843.1 249248 g60741 i0 38 0.914634146341463 50 31 91.5 0 15 164 342 391 CAF1381843.1 unnamed protein product [Adineta ricciae] diamond 150 41.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
32536704 32536704 PRJNA1137393_P_NODE_29579_length_182_cov_1.421053_g29063_i0 PRJNA1137393 29579 182 1.421053 2.58631646 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 41.6 0.0104   NR CAF1087084.1 104777 g29063 i0 39.5 0.708791208791209 43 26 70.9 0 129 1 4 46 CAF1087084.1 unnamed protein product [Brachionus calyciflorus] diamond 129 41.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;