contig_metadata
8 rows where bioproject = "PRJNA1137393", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4111889 | 4111889 | PRJNA1137393_P_NODE_8604_length_284_cov_1.395745_g8088_i0 | PRJNA1137393 | 8604 | 284 | 1.395745 | 3.9639158 | Pythium insidiosum | 114742 | SAR_Eukaryotes | SAR_Eukaryotes | 207 | 5.29e-49 | NTclustered | gi|2020025744|dbj|LC553017.1| | 114742 | g8088 | i0 | 79.93 | 90.2992957746479 | 284 | 55 | 99 | 2 | 2 | 284 | 360 | 642 | Pythium insidiosum Pi32 mitochondrial coxI gene for cytochrome c oxidase subunit I, partial cds | blastn | 25645 | 207 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 9212840 | 9212840 | PRJNA1137393_P_NODE_7348_length_311_cov_3.908397_g6832_i0 | PRJNA1137393 | 7348 | 311 | 3.908397 | 12.15511467 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 547 | 3.0399999999999987e-151 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g6832 | i0 | 98.392 | 15.427652733119 | 311 | 5 | 100 | 0 | 1 | 311 | 1243 | 1553 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 4798 | 547 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 10488227 | 10488227 | PRJNA1137393_P_NODE_25709_length_188_cov_1.733813_g25193_i0 | PRJNA1137393 | 25709 | 188 | 1.733813 | 3.25956844 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 257 | 3.1800000000000004e-64 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g25193 | i0 | 91.935 | 1.22340425531915 | 186 | 11 | 98 | 4 | 1 | 184 | 513 | 696 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 230 | 257 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 10488243 | 10488243 | PRJNA1137393_P_NODE_30469_length_181_cov_1.075758_g29953_i0 | PRJNA1137393 | 30469 | 181 | 1.075758 | 1.94712198 | Hyaloperonospora parasitica | 123356 | SAR_Eukaryotes | SAR_Eukaryotes | 137 | 4.13e-28 | NTclustered | gi|58042871|gb|AY785311.1| | 123356 | g29953 | i0 | 81.395 | 67.6740331491713 | 172 | 28 | 94 | 4 | 5 | 174 | 1333 | 1502 | Hyaloperonospora parasitica isolate Hind4 PPAT5 (Ppat5) gene, complete cds | blastn | 12249 | 137 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Hyaloperonospora | Hyaloperonospora parasitica | ||
| 14313698 | 14313698 | PRJNA1137393_P_NODE_5012_length_394_cov_32.014493_g4496_i0 | PRJNA1137393 | 5012 | 394 | 32.014493 | 126.13710242 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 91.6 | 7.99e-14 | NTclustered | gi|325194684|emb|FR825494.1| | 890382 | g4496 | i0 | 77.439 | 0.916243654822335 | 164 | 30 | 41 | 7 | 234 | 394 | 202 | 43 | Albugo laibachii Nc14, genomic contig CONTIG_2365_NC14_v4_847_33331 | blastn | 361 | 91.6 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 20686113 | 20686113 | PRJNA1137393_P_NODE_2957_length_554_cov_2.831683_g2453_i0 | PRJNA1137393 | 2957 | 554 | 2.831683 | 15.68752382 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 296 | 2.28e-75 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g2453 | i0 | 78.233 | 0.922382671480144 | 464 | 99 | 84 | 2 | 3 | 465 | 463 | 1 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 511 | 296 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 23236990 | 23236990 | PRJNA1137393_P_NODE_2759_length_576_cov_3.104364_g2256_i0 | PRJNA1137393 | 2759 | 576 | 3.104364 | 17.88113664 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 664 | 0 | NTclustered | gi|325194231|emb|FR825088.1| | 890382 | g2256 | i0 | 87.586 | 1.1875 | 580 | 63 | 100 | 9 | 1 | 576 | 1244 | 670 | Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 | blastn | 684 | 664 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 29501810 | 29501810 | PRJNA1137393_P_NODE_39630_length_169_cov_0.866667_g39114_i0 | PRJNA1137393 | 39630 | 169 | 0.866667 | 1.46466723 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 39.3 | 0.0482 | NR | RHZ01083.1 | 112090 | g39114 | i0 | 61.5 | 0.461538461538462 | 26 | 10 | 46.2 | 0 | 2 | 79 | 40 | 65 | RHZ01083.1 hypothetical protein DYB35_007189 [Aphanomyces astaci] | diamond | 78 | 39.3 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;