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contig_metadata

12 rows where bioproject = "PRJNA1137393", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA1137393 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2307449 2307449 PRJNA1137393_P_NODE_73702_length_162_cov_0.884956_g73186_i0 PRJNA1137393 73702 162 0.884956 1.43362872 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 122 1.0099999999999999e-23   NTclustered gi|309242852|emb|FN557046.1| 303400 g73186 i0 86.607 75.0617283950617 112 13 69 2 1 111 509 619 Nitzschia palea mitochondrial partial cox1 gene for cytochrome oxidase subunit 1, strain New Spain1 blastn 12160 122 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia palea
3582567 3582567 PRJNA1137393_P_NODE_3823_length_471_cov_4.376777_g3311_i0 PRJNA1137393 3823 471 4.376777 20.61461967 Naviculales 38748 SAR_Eukaryotes SAR_Eukaryotes 819 0   NTclustered gi|1803023461|gb|MN937452.1| 2850 g3311 i0 98.287 195.2016985138 467 8 99 0 1 467 68234 68700 Phaeodactylum tricornutum strain ICE-H chloroplast, complete genome blastn 91940 819 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
4860195 4860195 PRJNA1137393_P_NODE_69424_length_162_cov_1.769912_g68908_i0 PRJNA1137393 69424 162 1.769912 2.86725744 Stephanodiscus 29206 SAR_Eukaryotes SAR_Eukaryotes 226 7.509999999999998e-55   NTclustered gi|1042709429|gb|KT157784.1| 1869246 g68908 i0 92.903 97.7469135802469 155 11 96 0 8 162 482 328 Stephanodiscus cf. minutulus strain y96-2 cytochrome c oxidase subunit I (coxI) gene, partial cds; mitochondrial blastn 15835 226 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus cf. minutulus
6662646 6662646 PRJNA1137393_P_NODE_5806_length_359_cov_3.219355_g5290_i0 PRJNA1137393 5806 359 3.219355 11.55748445 Guinardia delicatula 1244696 SAR_Eukaryotes SAR_Eukaryotes 608 1.609999999999999e-169   NTclustered gi|2074156200|gb|MW413905.1| 216802 g5290 i0 98 99.2479108635097 350 7 97 0 10 359 746 397 Guinardia delicatula mitochondrion, complete genome blastn 35630 608 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia delicatula
9212689 9212689 PRJNA1137393_P_NODE_33008_length_177_cov_1.312500_g32492_i0 PRJNA1137393 33008 177 1.3125 2.323125 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 63.9 6.91e-6   NTclustered gi|1819718724|gb|MN956530.1| 2850 g32492 i0 95 0.649717514124294 40 2 23 0 96 135 23575 23614 Phaeodactylum tricornutum strain ICE-H mitochondrion, complete genome blastn 115 63.9 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
9212745 9212745 PRJNA1137393_P_NODE_4788_length_406_cov_4.224090_g4273_i0 PRJNA1137393 4788 406 4.22409 17.1498054 Guinardia striata 1514137 SAR_Eukaryotes SAR_Eukaryotes 597 3.9899999999999983e-166   NTclustered gi|2074156236|gb|MW413904.1| 1514137 g4273 i0 98.806 79.1083743842365 335 4 83 0 1 335 416 750 Guinardia striata mitochondrion, complete genome blastn 32118 597 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia striata
15587610 15587610 PRJNA1137393_P_NODE_36693_length_172_cov_1.398374_g36177_i0 PRJNA1137393 36693 172 1.398374 2.40520328 uncultured Ardissonea 1219486 SAR_Eukaryotes SAR_Eukaryotes 267 4.73e-67   NTclustered gi|405131986|gb|JX456225.1| 1219486 g36177 i0 94.318 59.6744186046512 176 6 100 4 1 172 82 257 Uncultured Ardissonea clone LIT1 18S ribosomal RNA gene, partial sequence blastn 10264 267 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae   uncultured Ardissonea
21433991 21433991 PRJNA1137393_P_NODE_4777_length_407_cov_3.527933_g4262_i0 PRJNA1137393 4777 407 3.527933 14.35868731 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 678 0   NTclustered gi|1783235058|gb|MN276191.1| 210602 g4262 i0 96.806 198.437346437346 407 12 100 1 1 407 97732 97327 Nanofrustulum shiloi strain SZCZM404 chloroplast, complete genome blastn 80764 678 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Staurosiraceae Nanofrustulum Nanofrustulum shiloi
21434044 21434044 PRJNA1137393_P_NODE_8357_length_288_cov_4.347280_g7841_i0 PRJNA1137393 8357 288 4.34728 12.5201664 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 505 1.7e-138   NTclustered gi|2127877134|ref|NC_058783.1| 37318 g7841 i0 98.264 197.006944444444 288 5 100 0 1 288 47274 46987 Pseudo-nitzschia pungens isolate CNS00141 chloroplast, complete genome blastn 56738 510 0.990196078431373 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia pungens
22708990 22708990 PRJNA1137393_P_NODE_6918_length_323_cov_1.302920_g6402_i0 PRJNA1137393 6918 323 1.30292 4.2084316 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 183 1.03e-41   NTclustered gi|2073953076|gb|MW849265.1| 2856 g6402 i0 78.344 24.8482972136223 314 46 93 16 10 310 33160 33464 Cylindrotheca closterium isolate Qingdao in China mitochondrion, complete genome blastn 8026 183 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
28523241 28523241 PRJNA1137393_P_NODE_53507_length_166_cov_0.888889_g52991_i0 PRJNA1137393 53507 166 0.888889 1.47555574 Cyclostephanos tholiformis 382380 SAR_Eukaryotes SAR_Eukaryotes 80.9 4.6e-16   NR KAL3808565.1 382380 g52991 i0 69.8 0.957831325301205 53 16 95.8 0 164 6 2326 2378 KAL3808565.1 hypothetical protein ACHAXA_001070 [Cyclostephanos tholiformis] diamond 159 80.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
30986805 30986805 PRJNA1137393_P_NODE_41934_length_169_cov_0.866667_g41418_i0 PRJNA1137393 41934 169 0.866667 1.46466723 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 91.7 1.18e-20   NR XP_002177788.1 556484 g41418 i0 80.8 2.85798816568047 52 10 92.3 0 168 13 227 278 XP_002177788.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] diamond 483 91.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;