RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1137393", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA1137393 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2835565 2835565 PRJNA1137393_P_NODE_9163_length_274_cov_1.644444_g8647_i0 PRJNA1137393 9163 274 1.644444 4.50577656 Phyllochaetopterus sp. 3 KJO-2 3048024 Annelida Annelida 162 3.2e-48   NR ABB17298.1 352252 g8647 i0 90.1 0.996350364963504 91 9 99.6 0 273 1 130 220 ABB17298.1 cytochrome oxidase subunit I, partial [Phyllochaetopterus sp. 3 KJO-2005] diamond 273 162 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Chaetopteridae Phyllochaetopterus Phyllochaetopterus sp. 3 KJO-2005
5387907 5387907 PRJNA1137393_P_NODE_32285_length_178_cov_1.333333_g31769_i0 PRJNA1137393 32285 178 1.333333 2.37333274 Ailoscolex lacteospumosus 1046305 Annelida Annelida 124 3.15e-24   NTclustered gi|2920003456|emb|OZ238864.1| 1046305 g31769 i0 84.8 27.8876404494382 125 17 70 2 5 128 8876048 8875925 Ailoscolex lacteospumosus genome assembly, chromosome: 5 blastn 4964 124 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
6134933 6134933 PRJNA1137393_P_NODE_40725_length_169_cov_0.866667_g40209_i0 PRJNA1137393 40725 169 0.866667 1.46466723 Metazoa 33208 Annelida Annelida 63.9 6.52e-6   NTclustered gi|38154530|gb|AY364867.1| 152469 g40209 i0 100 0.804733727810651 34 0 20 0 1 34 2388 2421 Hrabeiella periglandulata 28S ribosomal RNA gene, partial sequence blastn 136 63.9 1 Eukaryota Opisthokonta Metazoa Annelida       Hrabeiella Hrabeiella periglandulata
24510718 24510718 PRJNA1137393_P_NODE_54220_length_166_cov_0.888889_g53704_i0 PRJNA1137393 54220 166 0.888889 1.47555574 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.014   NTclustered gi|2920003371|emb|OZ238862.1| 1046305 g53704 i0 100 0.168674698795181 28 0 17 0 52 79 37581319 37581292 Ailoscolex lacteospumosus genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;