RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1137393", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 6 ✖

tax_clade 1

  • Amoebozoa · 6 ✖

bioproject 1

  • PRJNA1137393 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9212846 9212846 PRJNA1137393_P_NODE_75368_length_151_cov_87.470588_g74852_i0 PRJNA1137393 75368 151 87.470588 132.08058788 Protostelium mycophagum 472931 Evosea other_Eukaryota 183 4.19e-42   NTclustered gi|290886108|gb|GU477644.1| 472931 g74852 i0 96.396 8.35099337748344 111 4 74 0 41 151 864 754 Protostelium mycophagum strain HI04-85A-1b 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 1261 183 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
10488256 10488256 PRJNA1137393_P_NODE_35489_length_173_cov_41.967742_g34973_i0 PRJNA1137393 35489 173 41.967742 72.60419366 Protostelium mycophagum 472931 Evosea other_Eukaryota 298 1.69e-76   NTclustered gi|262262902|gb|FJ766445.1| 472931 g34973 i0 97.688 72.728323699422 173 4 100 0 1 173 1639 1811 Protostelium mycophagum strain KA-T02-1 small subunit ribosomal RNA gene, partial sequence blastn 12582 298 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
16861919 16861919 PRJNA1137393_P_NODE_6614_length_331_cov_16.595745_g6098_i0 PRJNA1137393 6614 331 16.595745 54.93191595 Protostelium mycophagum 472931 Evosea other_Eukaryota 411 4.459999999999999e-110   NTclustered gi|290886107|gb|GU477643.1| 472931 g6098 i0 99.123 98.8489425981873 228 2 69 0 1 228 333 106 Protostelium mycophagum strain BRNFDF05-11a-3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence blastn 32719 411 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
19410582 19410582 PRJNA1137393_P_NODE_13156_length_232_cov_11.672131_g12640_i0 PRJNA1137393 13156 232 11.672131 27.07934392 Protostelium mycophagum 472931 Evosea other_Eukaryota 422 1.37e-113   NTclustered gi|262262901|gb|FJ766444.1| 472931 g12640 i0 99.567 43.5560344827586 231 1 99 0 1 231 1243 1473 Protostelium mycophagum strain BRNFDF05-11A-3 small subunit ribosomal RNA gene, partial sequence blastn 10105 422 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
28302084 28302084 PRJNA1137393_P_NODE_57666_length_165_cov_0.896552_g57150_i0 PRJNA1137393 57666 165 0.896552 1.4793108 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 41.2 0.0459   NR PRP83539.1 1890364 g57150 i0 53.1 0.581818181818182 32 15 58.2 0 160 65 64 95 PRP83539.1 elastin [Planoprotostelium fungivorum] diamond 96 41.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30133208 30133208 PRJNA1137393_P_NODE_16252_length_216_cov_1.245509_g15736_i0 PRJNA1137393 16252 216 1.245509 2.69029944 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 74.7 6.03e-14   NR PRP81122.1 1890364 g15736 i0 62.7 0.819444444444444 59 22 81.9 0 215 39 224 282 PRP81122.1 60S ribosomal protein L7a [Planoprotostelium fungivorum] diamond 177 74.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;