RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1136957" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 2 ✖

bioproject 1

  • PRJNA1136957 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26785701 26785701 PRJNA1136957_S_NODE_17481_length_208_cov_1.865772_g17384_i0 PRJNA1136957 17481 208 1.865772 3.88080576 Candidatus Naiadarchaeales archaeon SRR2090153.bin1042 2756137 Archaea Archaea 84.7 3.87e-17   NR HIJ98657.1 2756137 g17384 i0 56.5 0.995192307692308 69 30 99.5 0 207 1 54 122 HIJ98657.1 hypothetical protein [Candidatus Naiadarchaeales archaeon SRR2090153.bin1042] diamond 207 84.7 1 Archaea   Nanobdellati Candidatus Undinarchaeota Candidatus Undinarchaeia Candidatus Naiadarchaeales     Candidatus Naiadarchaeales archaeon SRR2090153.bin1042
26817385 26817385 PRJNA1136957_S_NODE_16881_length_212_cov_1.496732_g16784_i0 PRJNA1136957 16881 212 1.496732 3.17307184 Methanobacteriota archaeon 2026739 Archaea Archaea 45.8 0.00196   NR GIR00756.1 2026739 g16784 i0 52.8 0.509433962264151 36 17 50.9 0 17 124 237 272 GIR00756.1 MAG: cobalamin biosynthesis protein CobW [Methanobacteriota archaeon] diamond 108 45.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;