RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1136957", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1136957 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29091573 29091573 PRJNA1136957_S_NODE_5568_length_340_cov_4.209964_g5471_i0 PRJNA1136957 5568 340 4.209964 14.3138776 Capsulimonadales bacterium 2971800 Bacteria Bacteria 94 5.41e-22   NR MDX1932757.1 2971800 g5471 i0 58.5 3.72352941176471 82 34 72.4 0 9 254 47 128 MDX1932757.1 Rid family detoxifying hydrolase [Capsulimonadales bacterium] diamond 1266 94 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
29691005 29691005 PRJNA1136957_S_NODE_10990_length_258_cov_1.226131_g10893_i0 PRJNA1136957 10990 258 1.226131 3.16341798 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.1 0.0331   NR HIE51766.1 2033014 g10893 i0 37.1 0.720930232558139 62 39 72.1 0 5 190 166 227 HIE51766.1 rhamnosidase [Armatimonadota bacterium] diamond 186 43.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;