RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1136957", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1136957 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7937664 7937664 PRJNA1136957_S_NODE_8787_length_285_cov_1.349558_g8690_i0 PRJNA1136957 8787 285 1.349558 3.8462403 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 62.1 4.37e-5   NTclustered gi|915013718|ref|XM_013396634.1| 5801 g8690 i0 97.297 10.6561403508772 37 0 13 1 247 283 5690 5725 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 3037 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
32399073 32399073 PRJNA1136957_S_NODE_12399_length_244_cov_4.286486_g12302_i0 PRJNA1136957 12399 244 4.286486 10.45902584 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 50.4 6.78e-5   NR XP_013230724.1 5802 g12302 i0 59.5 0.909836065573771 37 15 45.5 0 243 133 280 316 XP_013230724.1 uncharacterized protein ETH_00037950, partial [Eimeria tenella] diamond 222 50.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;