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contig_metadata

8 rows where bioproject = "PRJNA1136957" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 8 ✖

bioproject 1

  • PRJNA1136957 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9212624 9212624 PRJNA1136957_S_NODE_5788_length_336_cov_1.480144_g5691_i0 PRJNA1136957 5788 336 1.480144 4.97328384 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 529 1.1999999999999997e-145   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g5691 i0 99.317 78.1994047619048 293 1 87 1 44 336 1144 853 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 26275 529 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
14313532 14313532 PRJNA1136957_S_NODE_19892_length_197_cov_0.869565_g19795_i0 PRJNA1136957 19892 197 0.869565 1.71304305 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 333 5.44e-87   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g19795 i0 97.436 70.2741116751269 195 5 99 0 3 197 1714 1908 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 13844 333 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
14313568 14313568 PRJNA1136957_S_NODE_7552_length_303_cov_2.331967_g7455_i0 PRJNA1136957 7552 303 2.331967 7.06586001 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 555 1.7599999999999995e-153   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g7455 i0 99.67 41.3630363036304 303 1 100 0 1 303 1469 1771 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 12533 555 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
16861662 16861662 PRJNA1136957_S_NODE_12114_length_247_cov_1.271277_g12017_i0 PRJNA1136957 12114 247 1.271277 3.14005419 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 457 4.05e-124   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g12017 i0 100 23.6963562753036 247 0 100 0 1 247 373 127 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 5853 457 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
23236847 23236847 PRJNA1136957_S_NODE_10899_length_259_cov_1.750000_g10802_i0 PRJNA1136957 10899 259 1.75 4.5325 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 479 9.13e-131   NTclustered gi|4469329|emb|AJ224886.1| 74082 g10802 i0 100 52.8069498069498 259 0 100 0 1 259 745 487 Vahlkampfia avara SSU rRNA gene, strain CCAP 1588/1A blastn 13677 479 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
26627185 26627185 PRJNA1136957_S_NODE_10321_length_266_cov_0.884058_g10224_i0 PRJNA1136957 10321 266 0.884058 2.35159428 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 43.5 0.0257   NR XP_002681807.1 5762 g10224 i0 42.4 0.665413533834586 59 32 66.5 1 26 202 400 456 XP_002681807.1 uncharacterized protein NAEGRDRAFT_63009 [Naegleria gruberi] diamond 177 43.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27101893 27101893 PRJNA1136957_S_NODE_16442_length_215_cov_1.173077_g16345_i0 PRJNA1136957 16442 215 1.173077 2.52211555 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 75.1 1.01e-13   NR XP_044550459.1 51637 g16345 i0 50.7 2.97209302325581 71 34 99.1 1 214 2 513 582 XP_044550459.1 uncharacterized protein C9374_002211 [Naegleria lovaniensis] diamond 639 75.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
29375584 29375584 PRJNA1136957_S_NODE_15329_length_222_cov_1.496933_g15232_i0 PRJNA1136957 15329 222 1.496933 3.32319126 Leishmania naiffi 5678 Euglenozoa other_Eukaryota 41.6 0.046   NR KAL0530592.1 5678 g15232 i0 46 0.675675675675676 50 25 64.9 1 221 78 35 84 KAL0530592.1 putative ABC-2 family transporter protein [Leishmania naiffi] diamond 150 41.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania naiffi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;