RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1136505" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1136505 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27418276 27418276 PRJNA1136505_P_NODE_34403_length_611_cov_2.934944_g27599_i0 PRJNA1136505 34403 611 2.934944 17.93250784 Thermoprotei archaeon 2250277 Archaea Archaea 66.2 1.3e-9   NR RLF21278.1 2250277 g27599 i0 39 2.13584288052373 105 54 50.1 3 319 14 86 183 RLF21278.1 MAG: hypothetical protein DRN15_11470 [Thermoprotei archaeon] diamond 1305 66.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
28775622 28775622 PRJNA1136505_P_NODE_143707_length_245_cov_1.889535_g136847_i0 PRJNA1136505 143707 245 1.889535 4.62936075 Thermoprotei archaeon 2250277 Archaea Archaea 42.4 0.0438   NR RLG76514.1 2250277 g136847 i0 28.2 0.955102040816327 78 53 95.5 1 243 10 104 178 RLG76514.1 MAG: metallophosphoesterase [Thermoprotei archaeon] diamond 234 42.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;